FC872155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872155 vs. ExPASy Swiss-Prot
Match: RL24_CANGA (60S ribosomal protein L24 OS=Candida glabrata GN=RPL24 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.689e-25 Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = 1 Query: 37 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 384 +K E+ FSGAKIYPG+G F+R DS++F F NSK F R P ++ WT +YR+ HKK I E KK+ R T K R+IVGA+LE+I++RR+ KPEVR A R+ + KE+ Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRVAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAIVGASLELIKERRSLKPEVRKAKRDDKAKADKEK 115
BLAST of FC872155 vs. ExPASy Swiss-Prot
Match: RL24A_YEAST (60S ribosomal protein L24-A OS=Saccharomyces cerevisiae GN=RPL24A PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.124e-25 Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 37 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 384 +K E+ FSGAKIYPG+G F+R DS++F F NSK F R P ++ WT ++RK HKK I E KK+ R T K R I GA+L++I++RR+ KPEVR A RE L+ KE+ Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKLKANKEK 115
BLAST of FC872155 vs. ExPASy Swiss-Prot
Match: RL24B_YEAST (60S ribosomal protein L24-B OS=Saccharomyces cerevisiae GN=RPL24B PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.998e-25 Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 37 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 384 +K E+ FSGAKIYPG+G F+R DS++F F NSK F R P ++ WT ++RK HKK I E KK+ R T K R I GA+L++I++RR+ KPEVR A RE L+ KE+ Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKLKANKEK 115
BLAST of FC872155 vs. ExPASy Swiss-Prot
Match: RL24_KLULA (60S ribosomal protein L24 OS=Kluyveromyces lactis GN=RPL24 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.045e-24 Identity = 54/116 (46.55%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 37 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 384 +K E+ FSGAKIYPG+G F+R DS++F F +SK FH R P ++ WT +YR+ HKK I E +K+ R + K R++VGA+LE+I++RR+ KPEVR A R+ + KE+ Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVARKRTRKSVKA-QRAVVGASLELIKERRSLKPEVRKAQRDEKKKADKEK 115
BLAST of FC872155 vs. ExPASy Swiss-Prot
Match: RL24_NEUCR (60S ribosomal protein L24 OS=Neurospora crassa GN=rpl-24 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.782e-24 Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 1 Query: 58 FSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 384 FSG +IYPGKG ++R DS++F F N K + F R P ++ WT +YR+QHKK I+ E KK+ R T K R+IVGA+LEVI++RR+ +PE R AAR AA++E K + Sbjct: 8 FSGQRIYPGKGKLYVRGDSKIFRFQNGKSESLFLQRKNPRRIAWTVLYRRQHKKGISEEVAKKRSRRTVKA-QRAIVGASLEVIKERRSMRPEARSAARLAAIKESKAK 115
BLAST of FC872155 vs. ExPASy Swiss-Prot
Match: RL24_RAT (60S ribosomal protein L24 OS=Rattus norvegicus GN=Rpl24 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.327e-24 Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 37 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKE 381 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L I +R +KPEVR A RE A+R KE Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKE 114
BLAST of FC872155 vs. ExPASy Swiss-Prot
Match: RL24_MOUSE (60S ribosomal protein L24 OS=Mus musculus GN=Rpl24 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.327e-24 Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 37 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKE 381 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L I +R +KPEVR A RE A+R KE Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKE 114
BLAST of FC872155 vs. ExPASy Swiss-Prot
Match: RL24_MACFA (60S ribosomal protein L24 OS=Macaca fascicularis GN=RPL24 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.327e-24 Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 37 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKE 381 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L I +R +KPEVR A RE A+R KE Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKE 114
BLAST of FC872155 vs. ExPASy Swiss-Prot
Match: RL24_HUMAN (60S ribosomal protein L24 OS=Homo sapiens GN=RPL24 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.327e-24 Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 37 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKE 381 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L I +R +KPEVR A RE A+R KE Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKE 114
BLAST of FC872155 vs. ExPASy Swiss-Prot
Match: RL24_FELCA (60S ribosomal protein L24 OS=Felis catus GN=RPL24 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.327e-24 Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 37 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKE 381 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L I +R +KPEVR A RE A+R KE Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKE 114 The following BLAST results are available for this feature:
BLAST of FC872155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872155 ID=FC872155; Name=FC872155; organism=Citrus clementina; type=EST; length=616bpback to top |