FC872321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872321 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.425e-36 Identity = 74/131 (56.49%), Postives = 101/131 (77.10%), Query Frame = 1 Query: 4 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAEPQTIKI 390 QIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK D+ E+ R V G+ALADE GI F ETSAK NVE+ F ++A +IK R+A + ++P T+++ Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAEN-RVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQM 189
BLAST of FC872321 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.425e-36 Identity = 71/111 (63.96%), Postives = 94/111 (84.68%), Query Frame = 1 Query: 4 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 336 Q+WDTAGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK DM E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of FC872321 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.425e-36 Identity = 71/111 (63.96%), Postives = 94/111 (84.68%), Query Frame = 1 Query: 4 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 336 Q+WDTAGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK DM E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of FC872321 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.403e-36 Identity = 71/111 (63.96%), Postives = 94/111 (84.68%), Query Frame = 1 Query: 4 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 336 Q+WDTAGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK DM E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM-EAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDI 169
BLAST of FC872321 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.204e-35 Identity = 71/116 (61.21%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 4 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 351 QIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+D+ SK+ V S +A ADE GI F ETSAK NVE+ F ++A +IK R+A Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDL-TSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMA 174
BLAST of FC872321 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.204e-35 Identity = 75/133 (56.39%), Postives = 101/133 (75.94%), Query Frame = 1 Query: 4 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPD 402 Q+WDTAGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK DM E+KR V + + LA E+ I+FFETSAK+++NV+E F S+ARDI L T R + K + D Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM-EAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDI---LLKTGGRRSGNSSKPSSTD 188
BLAST of FC872321 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.572e-35 Identity = 70/111 (63.06%), Postives = 94/111 (84.68%), Query Frame = 1 Query: 4 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 336 Q+WDTAGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK DM E+KR V + + LA E+ I+FFETSAK+++NV+E F S+ARDI Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM-EAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169
BLAST of FC872321 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.572e-35 Identity = 69/123 (56.10%), Postives = 94/123 (76.42%), Query Frame = 1 Query: 4 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 372 QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI+QHA+++V ++L+ NK DMD KR VP KG+ +A E+ I+FFETSAK N+N+E+ F ++ DI ++ + +E Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLRNKCDMDH-KRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRKTPVKEPNSE 182
BLAST of FC872321 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.802e-35 Identity = 70/124 (56.45%), Postives = 93/124 (75.00%), Query Frame = 1 Query: 4 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 375 QIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+D+ K+ V +A ADE GI F ETSAK NVE+ F ++A +IK R+A +P Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDL-TGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVPPKP 182
BLAST of FC872321 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.738e-34 Identity = 69/131 (52.67%), Postives = 101/131 (77.10%), Query Frame = 1 Query: 4 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ-TIKIN 393 QIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK+D+ +K+ V + + AD+ GI F ETSAK NVE+ F ++A +IK R+ + ++ + ++KIN Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDSKPSVKIN 192 The following BLAST results are available for this feature:
BLAST of FC872321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872321 ID=FC872321; Name=FC872321; organism=Citrus clementina; type=EST; length=788bpback to top |