FC872342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872342 vs. ExPASy Swiss-Prot
Match: Y2178_STAAB (Putative 2-hydroxyacid dehydrogenase SAB2178 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB2178 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.281e-21 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 37 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 495 +GKT+GIIGLG IG AVA+RA AF + Y K + + Y + L N + + + +I+ E + LIN RGP V E+ L+ AL + + GA LDV+E EP + ++L L NVVL PH+G+ T E R M+ +V Sbjct: 144 SGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIV 299
BLAST of FC872342 vs. ExPASy Swiss-Prot
Match: Y2389_STAAR (Putative 2-hydroxyacid dehydrogenase SAR2389 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2389 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 58/156 (37.18%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 37 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 495 +GKT+GIIGLG IG AVA+RA AF + Y K + + Y + L N + + + +I+ E + LIN RGP V E+ L+ AL + GA LDV+E EP + ++L L NVVL PH+G+ T E R M+ +V Sbjct: 144 SGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIVHEQALVQALKNNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIV 299
BLAST of FC872342 vs. ExPASy Swiss-Prot
Match: DHGY_HYPME (Glycerate dehydrogenase OS=Hyphomicrobium methylovorum PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 1 Query: 31 RFTGKTVGIIGLGRIGMAVAKRAEAFICPINYY-----SIT*KPSLKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEAHF 519 + KT+GI G G IG A+AKRA+ F I+Y+ S + + S + ++ S+ L S + P T ETR N+ I +L +++N RG V+ +++AL GRL+ AG DVF EP++ E + L N L PH+GS + R+ MA ++A F Sbjct: 145 KLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQAREDMAHQANDLIDALF 312
BLAST of FC872342 vs. ExPASy Swiss-Prot
Match: Y2305_STAAM (Putative 2-hydroxyacid dehydrogenase SAV2305 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2305 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.399e-20 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 37 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 495 +GKT+GIIGLG IG AVA+RA AF + Y K + + Y + L N + + + +I+ E + LIN RGP V E+ L+ AL + + GA LDV+E EP + ++L L NVVL PH+G+ T E R M+ +V Sbjct: 144 SGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIV 299
BLAST of FC872342 vs. ExPASy Swiss-Prot
Match: Y2098_STAAN (Putative 2-hydroxyacid dehydrogenase SA2098 OS=Staphylococcus aureus (strain N315) GN=SA2098 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.399e-20 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 37 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 495 +GKT+GIIGLG IG AVA+RA AF + Y K + + Y + L N + + + +I+ E + LIN RGP V E+ L+ AL + + GA LDV+E EP + ++L L NVVL PH+G+ T E R M+ +V Sbjct: 144 SGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIV 299
BLAST of FC872342 vs. ExPASy Swiss-Prot
Match: GRHPR_HUMAN (Glyoxylate reductase/hydroxypyruvate reductase OS=Homo sapiens GN=GRHPR PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.399e-20 Identity = 64/171 (37.43%), Postives = 90/171 (52.63%), Query Frame = 1 Query: 37 TGKTVGIIGLGRIGMAVAKRAEAF-ICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEP-HVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPL 534 T TVGIIGLGRIG A+A+R + F + Y +P ++ + S ELA+ +VVAC T T + N++ + V IN+ RG V + +L AL G+++ AGLDV EP L L N V++PH+GS T TR TM+ L NL A +P+ Sbjct: 152 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPM 322
BLAST of FC872342 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.827e-20 Identity = 63/176 (35.80%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 40 GKTVGIIGLGRIGMAVAKRAEAFICPI----NYYSIT*KPSLKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLVL--------GNLEAHFLNKP 531 GKT+G+IGLGRIG V KRA+AF I Y S+ + + EL + + P T +TR II RE I + +++N RG ++E+ L AL EG++ A LDVFE EP L L NV+ PH G+ T E +K +V G L + +N P Sbjct: 139 GKTLGVIGLGRIGQQVVKRAKAFGMNIIGYDPYIPKEVAESMGVELVDDINELCKRADFITLHVPLTPKTRHIIGREQIALMKKNAIIVNCARGGLIDEKALYEALKEGKIRAAALDVFEEEPPKDNPLLTLDNVIGTPHQGASTEEAQKAAGTIVAEQIKKVLRGELAENVVNMP 314
BLAST of FC872342 vs. ExPASy Swiss-Prot
Match: Y1888_STAEQ (Putative 2-hydroxyacid dehydrogenase SERP1888 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1888 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.387e-20 Identity = 60/156 (38.46%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 37 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 495 +GKT+GIIGLG IG AVAKRA AF + Y K + Y + L N + + +I+ E + + LIN GRGP V E+ L+ AL + GA LDV+E EP + + L NVVL PH+G+ T E R MA +V Sbjct: 144 SGKTIGIIGLGEIGGAVAKRARAFDMDVLYTGPHRKEEKERDIGAKYVDLDTLLKNADFITINAAYNPSLHHMIDTEQFNKMKSTAYLINAGRGPIVNEQSLVEALDNKAIEGAALDVYEFEPEITDALKSFKNVVLTPHIGNATFEARDMMAKIV 299
BLAST of FC872342 vs. ExPASy Swiss-Prot
Match: TKRA_DICDI (Probable 2-ketogluconate reductase OS=Dictyostelium discoideum GN=tkrA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.387e-20 Identity = 58/160 (36.25%), Postives = 90/160 (56.25%), Query Frame = 1 Query: 43 KTVGIIGLGRIGMAVAKRAE-AFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEP-HVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNL 507 K VGIIG+GRIG +AKR F + YYS + ++ Y + + + S + V P ++ET+ + + + IN GRG V+E L+ AL G+++GAGLDVFE EP + +L L N+VL+PH+G+ T+ET+ M++ + NL Sbjct: 155 KKVGIIGMGRIGEVLAKRCRMGFDMEVAYYSRSRHLKVEELYDAKHQDLDTILSTSDFICVVLPGSQETKHFFSFGQFSKMKNSAIFINAGRGMTVDEVALIDALETGKIAGAGLDVFEKEPLNKDSKLLTLDNIVLLPHIGTSTIETQHIMSECAVNNL 314
BLAST of FC872342 vs. ExPASy Swiss-Prot
Match: Y1879_STAES (Putative 2-hydroxyacid dehydrogenase SE_1879 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1879 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.071e-20 Identity = 60/156 (38.46%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 37 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 495 +GKT+GIIGLG IG AVAKRA AF + Y K + Y + L N + + +I+ E + + LIN GRGP V E+ L+ AL + GA LDV+E EP + + L NVVL PH+G+ T E R MA +V Sbjct: 144 SGKTIGIIGLGEIGGAVAKRARAFDMDVLYTGPHRKEEKERDIGAKYVDLDTLLKNADFITINAAYNPSLHHMIDTEQFNKMKSTAYLINAGRGPIVNEQSLVEALDNKVIEGAALDVYEFEPEITDALKSFKNVVLTPHIGNATFEARDMMAKIV 299 The following BLAST results are available for this feature:
BLAST of FC872342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872342 ID=FC872342; Name=FC872342; organism=Citrus clementina; type=EST; length=778bpback to top |