FC872382

Overview
NameFC872382
Unique NameFC872382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length821
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28
Identity = 74/190 (38.95%), Postives = 104/190 (54.74%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LLD V   KPT+LIG  G+   F++EVI  M +  ++P++L LSNPTS+ E T  +   W++G A+ A+GSPFDP  +N K +   Q NN+YIFPG GLG++ SGA RV D+ML+ +S  LA+         G + PP  +I                E   A +    Q L K  ES  + P Y  Y+
Sbjct:  369 SLLDVVSNGKPTVLIGVPGL---FSQEVIMEMHAHCKRPIVLPLSNPTSRVEATPSDIIRWTEGDALIATGSPFDPVIFNEKTYPIAQCNNSYIFPGIGLGVLASGATRVTDEMLMESSRVLAECSPLAQNGNGALLPPLKDIHQVSHCIALAVAKKAVEQNKAPQRTEKQLLEK-IESYFWKPEYLKYK 554          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_PSE14 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sfcA PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.412e-28
Identity = 76/199 (38.19%), Postives = 100/199 (50.25%), Query Frame = 3
Query:   27 WAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            W    E    LLD V     T+LIG SG    FT++VI  +     KPL++ LSNPTS+ E T EE   W+ G A+ A+GSPF P E NG+     Q NN+YIFPG GLG+V   A R+ D ML+AAS ALA+       +   + PP   I+                 G+A      + L++  E   + P YR YR
Sbjct:  362 WTAGTEAFPQLLDVVTNAGATVLIGVSGQRGLFTEQVIRELHKHCAKPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRMLMAASNALAECSPMVTGQGDAVLPPLKEIQQVSRKIALAVAKEAQAEGLALETSE-EALLEAIERNFWLPGYRAYR 559          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_PSEU2 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sfcA PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.820e-28
Identity = 75/199 (37.69%), Postives = 100/199 (50.25%), Query Frame = 3
Query:   27 WAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            W    E    LLD V     T++IG SG    FT++VI  +     KPL++ LSNPTS+ E T EE   W+ G A+ A+GSPF P E NG+     Q NN+YIFPG GLG+V   A R+ D ML+AAS ALA+       +   + PP   I+                 G+A      + L++  E   + P YR YR
Sbjct:  362 WTAGSEAFPQLLDVVTHAGATVMIGVSGQRGLFTEQVIRELHKHCAKPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRMLMAASNALAECSPMVTGKGDAVLPPLKEIQQVSRKIALAVAREAQAEGLALETTE-EALLEAIERNFWLPGYRAYR 559          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_PSESM (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. tomato GN=sfcA PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.602e-28
Identity = 75/199 (37.69%), Postives = 99/199 (49.75%), Query Frame = 3
Query:   27 WAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            W    E    LLD V     T+LIG SG    FT++V+  +     KPL++ LSNPTS+ E T EE   W+ G A+ A+GSPF P E NG+     Q NN+YIFPG GLG+V   A R+ D ML+AAS ALA+       +   + PP   I+                 G+A      + L+   E   + P YR YR
Sbjct:  362 WTAGTETFPQLLDVVTHAGATVLIGVSGQRGLFTEQVVRELYKHCAKPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRMLMAASNALAECSPMVTGQGDAVLPPLKEIQQVSRKIALAVAKEAQAEGLALETSE-EALLAAIERNFWLPGYRAYR 559          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_VIBCH (NAD-dependent malic enzyme OS=Vibrio cholerae GN=sfcA PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.928e-28
Identity = 69/190 (36.32%), Postives = 101/190 (53.16%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +L D ++  KPT+L+G SG    F++E+I+ M     +P++  LSNPTS+ E    +   W+ G A+ A+GSPFDP  + GK +   Q NN+YIFPG GLG++ + A RV D+ML+ +S ALA          G + PP  +I                E GVA  +   + L    E   + PVYR Y+
Sbjct:  370 SLHDVIRNAKPTVLVGVSGAPGLFSEEIIKEMHQHCPRPIVFPLSNPTSRVEALPSDIIRWTNGEALVATGSPFDPVLHEGKTYPIVQCNNSYIFPGIGLGVLAANARRVTDEMLMESSRALASCSPLAINGHGPLLPPLESIHSVSKKIAFAVAKKAIEQGVAPEV-TDEALEASIEQHFWQPVYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_VIBC3 (NAD-dependent malic enzyme OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sfcA PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.928e-28
Identity = 69/190 (36.32%), Postives = 101/190 (53.16%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +L D ++  KPT+L+G SG    F++E+I+ M     +P++  LSNPTS+ E    +   W+ G A+ A+GSPFDP  + GK +   Q NN+YIFPG GLG++ + A RV D+ML+ +S ALA          G + PP  +I                E GVA  +   + L    E   + PVYR Y+
Sbjct:  370 SLHDVIRNAKPTVLVGVSGAPGLFSEEIIKEMHQHCPRPIVFPLSNPTSRVEALPSDIIRWTNGEALVATGSPFDPVLHEGKTYPIVQCNNSYIFPGIGLGVLAANARRVTDEMLMESSRALASCSPLAINGHGPLLPPLESIHSVSKKIAFAVAKKAIEQGVAPEV-TDEALEASIEQHFWQPVYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.928e-28
Identity = 71/190 (37.37%), Postives = 104/190 (54.74%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LL+ V   KPT+LIG SG    FT+E+I AM S   +P++  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   +   +   Q NN+YIFPG GLG++  GA RV ++ML+A+S ALA+         G + PP   I                E G A      + L++  E+  + P YR Y+
Sbjct:  370 SLLNVVNNAKPTVLIGVSGAPGLFTEEIIRAMHSHCARPIVFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDDVTYDIAQCNNSYIFPGIGLGVLACGANRVSNEMLMASSRALAECSPLAKDGSGPLLPPLEEIHDVSKHIAFAVAKVAIEQGHALD-TTDELLMQSIEANFWYPEYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.693e-27
Identity = 67/164 (40.85%), Postives = 99/164 (60.37%), Query Frame = 3
Query:   24 PWAHEHEPVNNL--------LDAVKVIKPTILIGSSGVGRTFTKEVIEAMA-SFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIR 485
            P+A  H  +  L         + VK +KP +L+G SGVG  F +EV+ AM  S + +P I A+SNPT+ +EC   +A+  +    +FASGSPF   +  NGK+    QANN Y+FPG GLG ++SGA  + D ML AA+E LA  ++++   +G++YP   +IR
Sbjct:  380 PFAKAHHEIEGLGLQEGAGLAEVVKKVKPHVLLGLSGVGGIFHEEVLRAMKESDSVRPAIFAMSNPTNNAECCPVDAFKLAGEDIVFASGSPFANVDLGNGKIGHVNQANNMYLFPGIGLGALLSGARNISDTMLEAAAECLASYMSDDEINRGILYPSIDDIR 543          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_SHEDO (NAD-dependent malic enzyme OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sfcA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.773e-27
Identity = 74/200 (37.00%), Postives = 106/200 (53.00%), Query Frame = 3
Query:   27 WAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLV-KCAESCMYTPVYRNYR 623
            W  E + V+ LL+ +   KPT+LIG SG    FT+ VI AM     +P++  LSNPTS+ E T E+   W+ G+A+ A+GSPF+P     + F   Q NN++IFPG GLG++   A RV D+ML+A+S ALA+         G + P   +I+                 G+A  LP    L+ K  E   + P YR Y+
Sbjct:  362 WHIEGDSVS-LLNVINNAKPTVLIGVSGSPGQFTEAVIRAMHLHCPRPIVFPLSNPTSRVEATPEDVLNWTNGQALVATGSPFEPVTIGDETFEIAQCNNSFIFPGIGLGVLACRAKRVSDEMLMASSRALAECSPLGTTRTGSLLPKLDDIQKVSKYIAFAVAKVAMAQGLA--LPLTDELLNKSIEKNFWEPKYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.773e-27
Identity = 74/214 (34.58%), Postives = 113/214 (52.80%), Query Frame = 3
Query:    6 LQHFKKPWAH-----EHEPVNNLLDAVKVIKP---TILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            LQ F++P         H  +++ +   +VIK    ++L G SG    FT+EV+E++ +  + P++L LSNPTS+ E T ++  TWS G+AI A+GSPF P  Y  +     Q NN+YIFPG GLG++ + A  + D+ML+AAS+ALA    +    KG + PP   IR                 G+A  +   + + +      + P YR YR
Sbjct:  344 LQAFQQPLIQYTKDLSHWDISSHIGLEQVIKQGNISVLFGVSGQPGLFTQEVVESLCANVDHPIVLPLSNPTSRVEATPKDITTWSHGQAIVATGSPFPPTLYENEYIEVSQCNNSYIFPGIGLGVLAARATAISDNMLMAASQALADASMQYEKVKGALLPPLGEIRPISKSIAYAVAKQAIADGLALPVSE-ETMQRRLVDNFWAPKYRTYR 556          
The following BLAST results are available for this feature:
BLAST of FC872382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO12_PHOPR2.613e-2838.95NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]
MAO1_PSE143.412e-2838.19NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_PSEU25.820e-2837.69NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_PSESM7.602e-2837.69NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_VIBCH9.928e-2836.32NAD-dependent malic enzyme OS=Vibrio cholerae GN=s... [more]
MAO1_VIBC39.928e-2836.32NAD-dependent malic enzyme OS=Vibrio cholerae sero... [more]
MAO1_SHEAM9.928e-2837.37NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAON_SOLTU1.693e-2740.85NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
MAO1_SHEDO3.773e-2737.00NAD-dependent malic enzyme OS=Shewanella denitrifi... [more]
MAO1_PSYIN3.773e-2734.58NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BB06ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872382 ID=FC872382; Name=FC872382; organism=Citrus clementina; type=EST; length=821bp
GGGCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTC
AACAATCTCTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGG
ATCATCTGGAGTTGGAAGAACTTTTACAAAAGAAGTAATCGAGGCCATGG
CCTCCTTCAATGAGAAACCTCTCATCCTGGCTCTCTCCAACCCAACCTCA
CAGTCAGAATGTACAGCTGAAGAAGCTTACACTTGGAGTAAGGGTCGTGC
AATTTTCGCTAGTGGAAGTCCATTTGATCCTTTTGAATACAATGGAAAAG
TTTTTGTTCCTGGCCAGGCCAACAATGCTTACATCTTCCCTGGATTTGGT
TTGGGTTTGGTCATCTCTGGAGCAATTCGGGTACATGACGACATGCTTCT
GGCAGCCTCGGAAGCCTTGGCAAAACAAGTGACAGAAGAGAACTTTGAGA
AGGGATTGATCTACCCACCATTTTCTAATATTAGAAAAATTTCAGCCAAT
ATAGCTGCTAATGTTGCTGCTAAGGCATATGAACTAGGCGTGGCTACGCG
TCTCCCTCGACCTCAGAATCTAGTGAAGTGCGCTGAAAGTTGCATGTATA
CCCCTGTCTACCGAAACTATCGTTAAATGTTCTGCCAAAATTTCTGTCTC
CGCTGAGTGTCTTTAAGCAAAAATAATGTCAAATAACTTGTTTTGGTGTG
TTATGGTGGCTTTTGTGCTTGTGTAAGTATTGCTGTATATGTGTACTTAT
CAAATGAAGGTGTTGGACCACTGCCTACATGGTTGAAGAATAGGAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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