FC872382

Overview
NameFC872382
Unique NameFC872382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length821
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig87 contig Ccv1_Contig87:431..1251. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ESCF3 (NAD-dependent malic enzyme OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sfcA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3 
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_EDWI9 (NAD-dependent malic enzyme OS=Edwardsiella ictaluri (strain 93-146) GN=sfcA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 77/199 (38.69%), Postives = 109/199 (54.77%), Query Frame = 3 
Query:   27 WAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            W  E E ++ LLD V+   PT+LIG SG    F++ ++  M S   +P+I+ LSNPTS+ E   E+   W+ G A+ ASGSPF+P  Y G+ +   Q NNAYIFPG GLG++ SGA RV D ML+AAS ALA          G + P   +I+                 GVA +    + L++  E   + P+YR+Y+
Sbjct:  365 WQTESEGIS-LLDVVRNAHPTVLIGVSGQPGLFSEAIVREMHSHCPRPIIMPLSNPTSRVEARPEDIINWTDGAALVASGSPFEPVLYQGERYPIAQCNNAYIFPGIGLGVLASGARRVTDGMLMAASRALADSSPLARDGHGSLLPDLKDIQQVSRDIAFQVAKAAQRQGVAVQ-TSDEALLQAIEHNFWLPIYRSYK 561
[Close]
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECOSM (NAD-dependent malic enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3 
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLU (NAD-dependent malic enzyme OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3 
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECO8A (NAD-dependent malic enzyme OS=Escherichia coli O8 (strain IAI1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3 
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECO81 (NAD-dependent malic enzyme OS=Escherichia coli O81 (strain ED1a) GN=sfcA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3 
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECO5E (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3 
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECO57 (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 GN=sfcA PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3 
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECO55 (NAD-dependent malic enzyme OS=Escherichia coli (strain 55989 / EAEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3 
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECO24 (NAD-dependent malic enzyme OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3 
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
The following BLAST results are available for this feature:
BLAST of FC872382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ESCF39.594e-3137.50NAD-dependent malic enzyme OS=Escherichia ferguson... [more]
MAO1_EDWI99.594e-3138.69NAD-dependent malic enzyme OS=Edwardsiella ictalur... [more]
MAO1_ECOSM9.594e-3137.50NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLU9.594e-3137.50NAD-dependent malic enzyme OS=Escherichia coli O17... [more]
MAO1_ECO8A9.594e-3137.50NAD-dependent malic enzyme OS=Escherichia coli O8 ... [more]
MAO1_ECO819.594e-3137.50NAD-dependent malic enzyme OS=Escherichia coli O81... [more]
MAO1_ECO5E9.594e-3137.50NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO579.594e-3137.50NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO559.594e-3137.50NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECO249.594e-3137.50NAD-dependent malic enzyme OS=Escherichia coli O13... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BB06ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872382 ID=FC872382; Name=FC872382; organism=Citrus clementina; type=EST; length=821bp
GGGCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTC
AACAATCTCTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGG
ATCATCTGGAGTTGGAAGAACTTTTACAAAAGAAGTAATCGAGGCCATGG
CCTCCTTCAATGAGAAACCTCTCATCCTGGCTCTCTCCAACCCAACCTCA
CAGTCAGAATGTACAGCTGAAGAAGCTTACACTTGGAGTAAGGGTCGTGC
AATTTTCGCTAGTGGAAGTCCATTTGATCCTTTTGAATACAATGGAAAAG
TTTTTGTTCCTGGCCAGGCCAACAATGCTTACATCTTCCCTGGATTTGGT
TTGGGTTTGGTCATCTCTGGAGCAATTCGGGTACATGACGACATGCTTCT
GGCAGCCTCGGAAGCCTTGGCAAAACAAGTGACAGAAGAGAACTTTGAGA
AGGGATTGATCTACCCACCATTTTCTAATATTAGAAAAATTTCAGCCAAT
ATAGCTGCTAATGTTGCTGCTAAGGCATATGAACTAGGCGTGGCTACGCG
TCTCCCTCGACCTCAGAATCTAGTGAAGTGCGCTGAAAGTTGCATGTATA
CCCCTGTCTACCGAAACTATCGTTAAATGTTCTGCCAAAATTTCTGTCTC
CGCTGAGTGTCTTTAAGCAAAAATAATGTCAAATAACTTGTTTTGGTGTG
TTATGGTGGCTTTTGTGCTTGTGTAAGTATTGCTGTATATGTGTACTTAT
CAAATGAAGGTGTTGGACCACTGCCTACATGGTTGAAGAATAGGAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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