FC872382

Overview
NameFC872382
Unique NameFC872382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length821
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig87 contig Ccv1_Contig87:431..1251. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLI (NAD-dependent malic enzyme OS=Escherichia coli (strain K12) GN=sfcA PE=3 SV=4)

HSP 1 Score: 133.265 bits (334), Expect = 1.636e-30
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 3
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLC (NAD-dependent malic enzyme OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=sfcA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.636e-30
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 3
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECOL6 (NAD-dependent malic enzyme OS=Escherichia coli O6 GN=sfcA PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.636e-30
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASEMLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWHAEYRDYR 561          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECOHS (NAD-dependent malic enzyme OS=Escherichia coli O9:H4 (strain HS) GN=sfcA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.636e-30
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 3
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECODH (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / DH10B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.636e-30
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 3
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ECOBW (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / BW2952) GN=sfcA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.636e-30
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 3
Query:   48 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  371 VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.761e-30
Identity = 75/191 (39.27%), Postives = 111/191 (58.12%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLV-KCAESCMYTPVYRNYR 623
            +LLD V   KPT+LIG SG    FT+E+I+AM S  ++P++  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   NG+ F   Q NN++IFPG GLG++  GA RV D+ML+A+S ALA+         G + P   +I+               + G+A  LP    L+ +  E+  + P YR Y+
Sbjct:  370 SLLDVVNNAKPTVLIGVSGSPGLFTEEIIKAMHSHCKRPIVFPLSNPTSRVEATPKDILNWTSGQALVATGSPFEPVIVNGETFEIAQCNNSFIFPGIGLGVLSCGARRVSDEMLMASSRALAECSPLGKDGVGSLLPRLEDIQTVSKYIAFAVAKAAIDQGLA--LPCTDELLQQSIEANFWEPEYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_VIBVU (NAD-dependent malic enzyme OS=Vibrio vulnificus GN=sfcA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.122e-30
Identity = 76/190 (40.00%), Postives = 100/190 (52.63%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LLD VK  KPT+LIG SG    FT+EVI+ M     +P++  LSNPTS+ E    +   W+ G A+ A+GSPFDP  + GK +   Q NN+YIFPG GLG++   A RV D+ML+ +S ALA         KG + PP   I                E GVA  +     L    E   + PVYR Y+
Sbjct:  370 SLLDVVKNAKPTVLIGVSGAPGLFTQEVIQEMHKHCPRPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDPVIHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGKGALLPPLEEIHTVSKRIAYAVAKKAIEQGVALEI-ADDALQVAIEQHFWQPVYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_PROMH (NAD-dependent malic enzyme OS=Proteus mirabilis (strain HI4320) GN=sfcA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.122e-30
Identity = 79/199 (39.70%), Postives = 107/199 (53.77%), Query Frame = 3
Query:   27 WAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            W  E + ++ LL+ VK  KPTILIG SG    FT+E+I  M    E+P ++ LSNPTS+ E   E+   W+ G+A+ A+GSPF P  Y  KV+   Q NN+YIFPG GLG++ SGA RV D ML+ AS ALA          G + P  ++I+                 GVAT +     L +  E   + P YR Y+
Sbjct:  365 WQTETDAIS-LLEVVKNAKPTILIGVSGQAGLFTEEIIREMHKHCERPTVMPLSNPTSRVEARPEDIINWTDGQALVATGSPFAPVTYKEKVYPIAQCNNSYIFPGIGLGVIASGAKRVTDAMLMVASRALADCSPMAKEGDGPLLPLLADIQQVSRYIAKQVAKEAQVQGVAT-VTSDSALEEAIERNYWEPEYRIYK 561          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO11_VIBVY (NAD-dependent malic enzyme 1 OS=Vibrio vulnificus (strain YJ016) GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.122e-30
Identity = 76/190 (40.00%), Postives = 100/190 (52.63%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LLD VK  KPT+LIG SG    FT+EVI+ M     +P++  LSNPTS+ E    +   W+ G A+ A+GSPFDP  + GK +   Q NN+YIFPG GLG++   A RV D+ML+ +S ALA         KG + PP   I                E GVA  +     L    E   + PVYR Y+
Sbjct:  370 SLLDVVKNAKPTVLIGVSGAPGLFTQEVIQEMHKHCPRPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDPVIHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGKGALLPPLEEIHTVSKRIAYAVAKKAIEQGVALEI-ADDALQVAIEQHFWQPVYRRYK 558          
The following BLAST results are available for this feature:
BLAST of FC872382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ECOLI1.636e-3036.98NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLC1.636e-3036.98NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOL61.636e-3037.50NAD-dependent malic enzyme OS=Escherichia coli O6 ... [more]
MAO1_ECOHS1.636e-3036.98NAD-dependent malic enzyme OS=Escherichia coli O9:... [more]
MAO1_ECODH1.636e-3036.98NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOBW1.636e-3036.98NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_SHEFN4.761e-3039.27NAD-dependent malic enzyme OS=Shewanella frigidima... [more]
MAO1_VIBVU8.122e-3040.00NAD-dependent malic enzyme OS=Vibrio vulnificus GN... [more]
MAO1_PROMH8.122e-3039.70NAD-dependent malic enzyme OS=Proteus mirabilis (s... [more]
MAO11_VIBVY8.122e-3040.00NAD-dependent malic enzyme 1 OS=Vibrio vulnificus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BB06ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872382 ID=FC872382; Name=FC872382; organism=Citrus clementina; type=EST; length=821bp
GGGCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTC
AACAATCTCTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGG
ATCATCTGGAGTTGGAAGAACTTTTACAAAAGAAGTAATCGAGGCCATGG
CCTCCTTCAATGAGAAACCTCTCATCCTGGCTCTCTCCAACCCAACCTCA
CAGTCAGAATGTACAGCTGAAGAAGCTTACACTTGGAGTAAGGGTCGTGC
AATTTTCGCTAGTGGAAGTCCATTTGATCCTTTTGAATACAATGGAAAAG
TTTTTGTTCCTGGCCAGGCCAACAATGCTTACATCTTCCCTGGATTTGGT
TTGGGTTTGGTCATCTCTGGAGCAATTCGGGTACATGACGACATGCTTCT
GGCAGCCTCGGAAGCCTTGGCAAAACAAGTGACAGAAGAGAACTTTGAGA
AGGGATTGATCTACCCACCATTTTCTAATATTAGAAAAATTTCAGCCAAT
ATAGCTGCTAATGTTGCTGCTAAGGCATATGAACTAGGCGTGGCTACGCG
TCTCCCTCGACCTCAGAATCTAGTGAAGTGCGCTGAAAGTTGCATGTATA
CCCCTGTCTACCGAAACTATCGTTAAATGTTCTGCCAAAATTTCTGTCTC
CGCTGAGTGTCTTTAAGCAAAAATAATGTCAAATAACTTGTTTTGGTGTG
TTATGGTGGCTTTTGTGCTTGTGTAAGTATTGCTGTATATGTGTACTTAT
CAAATGAAGGTGTTGGACCACTGCCTACATGGTTGAAGAATAGGAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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