FC872382

Overview
NameFC872382
Unique NameFC872382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length821
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_SHESR (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.061e-29
Identity = 74/191 (38.74%), Postives = 108/191 (56.54%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQN-LVKCAESCMYTPVYRNYR 623
            +LLD V  +KPT+LIG SG    FT+E++ AM S  E+P+I  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   +G+ +   Q NN++IFPG GLG++ SGA  V D ML+A+S ALA+         G + P   +I                E G++  LP     L++  E   + P YR Y+
Sbjct:  370 SLLDVVNNVKPTVLIGVSGAPGLFTEEIVRAMHSHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLS--LPASDELLMQSIEDNFWKPEYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_SHESM (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.061e-29
Identity = 74/191 (38.74%), Postives = 108/191 (56.54%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQN-LVKCAESCMYTPVYRNYR 623
            +LLD V  +KPT+LIG SG    FT+E++ AM S  E+P+I  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   +G+ +   Q NN++IFPG GLG++ SGA  V D ML+A+S ALA+         G + P   +I                E G++  LP     L++  E   + P YR Y+
Sbjct:  370 SLLDVVNNVKPTVLIGVSGAPGLFTEEIVRAMHSHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLS--LPASDELLMQSIEDNFWKPEYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.385e-29
Identity = 78/214 (36.45%), Postives = 113/214 (52.80%), Query Frame = 3
Query:    6 LQHFKKPWAHEHEPVNN--------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            LQ F+ P   +   + +        L   VK  + T+L G SG    FT+EV+EA+ +  E P++L LSNPTS+ E T +E   WS+G+AI A+GSPF    + G+ +   Q NN+YIFPG GLG++ + A  + D+ML AAS+ALA    E     G I PP   IR               E  +A  +   +NL +  ++  + P YR+YR
Sbjct:  344 LQKFQTPLVQKESDIEHWDKSQKLGLAQVVKQARITVLFGVSGQKGLFTQEVVEALCANTEHPIVLPLSNPTSRVEATPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDNMLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPV-TAENLERRLKANFWLPKYRDYR 556          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.809e-29
Identity = 69/198 (34.85%), Postives = 112/198 (56.57%), Query Frame = 3
Query:   21 KPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYR 614
            K W  + +      + V+  KPTILIG+SGV   FT+E+++ MAS  ++P+I+ +SNPT  +E   E+ + W+ G+ + A+GSPFD  EYNG  +  GQ+NNA+ FPG GLG +++ A  +   M  A ++A+A+ V  E    GL+ P    ++               + GVA R  +P+++ +     M+TP Y+
Sbjct:  383 KDWKRDEKGQIPFDEVVRQAKPTILIGTSGVSGAFTEEIVKEMASHVDRPVIMPMSNPTHLAEAVPEDLFKWTDGKVLIATGSPFDNVEYNGVSYEIGQSNNAFAFPGLGLGSIVAEARIITPAMFAATADAIAEMVDLETPGAGLL-PSIDKLQEVSIQVAIAVAEAAIKDGVANR--QPEDVKQAVLDAMWTPEYK 577          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_ERWT9 (NAD-dependent malic enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.809e-29
Identity = 74/190 (38.95%), Postives = 104/190 (54.74%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LLD V+  KP I+IG SG    F++E++  M     +P+I+ LSNPTS+ E T ++   W+ G A+ A+GSPF P  +  K +   Q NN+YIFPG GLG++ SGA RV D ML+AAS ALA      N  +G + P  ++I+                 GVA  +     L K   +  + P YRNYR
Sbjct:  373 SLLDVVRNAKPDIMIGVSGQPGLFSEEIVREMHKHCTRPIIMPLSNPTSRVEATPQDIMAWTDGCALVATGSPFSPVSWKDKTYPIAQCNNSYIFPGIGLGVIASGASRVTDSMLMAASRALADCSPLVNDGEGPVLPEVNDIQGVSKIIAMAVGKAAQLAGVAV-VTSEDVLSKAIAANFWLPQYRNYR 561          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.363e-29
Identity = 75/191 (39.27%), Postives = 107/191 (56.02%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLV-KCAESCMYTPVYRNYR 623
            +LLD V   KPT+LIG SGV   FT+E+I AM S   +P+I  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   +G+ F   Q NN++IFPG GLG++ SGA  V D ML+A+S ALA+         G + P   +I                E G+   LP    ++ +  E   ++P YR Y+
Sbjct:  370 SLLDVVNNTKPTVLIGVSGVPGLFTEEIIRAMHSHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETFEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLT--LPMSDEILQQSIEGNFWSPEYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.363e-29
Identity = 75/191 (39.27%), Postives = 107/191 (56.02%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLV-KCAESCMYTPVYRNYR 623
            +LLD V   KPT+LIG SGV   FT+E+I AM S   +P+I  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   +G+ F   Q NN++IFPG GLG++ SGA  V D ML+A+S ALA+         G + P   +I                E G+   LP    ++ +  E   ++P YR Y+
Sbjct:  370 SLLDVVNNTKPTVLIGVSGVPGLFTEEIIRAMHSHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETFEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLT--LPMSDEILQQSIEGNFWSPEYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29
Identity = 75/191 (39.27%), Postives = 108/191 (56.54%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLV-KCAESCMYTPVYRNYR 623
            +LLD V   KPT+LIG SG    F++E+I+AM S   +P++  LSNPTS+ E T ++   W+KG+A+ A+GSPF+P     + F   Q NN+YIFPG GLG++ +GA RV ++ML+A+S ALA+        +G + PP   I                E G A  LP    L+ +  E   +T  YR Y+
Sbjct:  370 SLLDVVNNAKPTVLIGVSGAPGVFSEEIIKAMHSHCPRPIVFPLSNPTSRVEATPKDLLHWTKGQALVATGSPFEPVVVEDETFEIAQCNNSYIFPGIGLGVLAAGAKRVSNEMLMASSRALAECSPLALDGEGPLLPPLEEIHKVSKHIALAVGKVAIEQGHA--LPCTDELLEQSIEDNFWTAEYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_SHESA (NAD-dependent malic enzyme OS=Shewanella sp. (strain ANA-3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29
Identity = 74/191 (38.74%), Postives = 107/191 (56.02%), Query Frame = 3
Query:   54 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQN-LVKCAESCMYTPVYRNYR 623
            +LLD V   KPT+LIG SG    FT+E++ AM S  E+P+I  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   +G+ +   Q NN++IFPG GLG++ SGA  V D ML+A+S ALA+         G + P   +I                E G++  LP     L++  E   + P YR Y+
Sbjct:  370 SLLDVVNNAKPTVLIGVSGAPGLFTEEIVRAMHSHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLS--LPASDELLMQSIEDNFWKPEYRRYK 558          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAO1_SHELP (NAD-dependent malic enzyme OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29
Identity = 77/200 (38.50%), Postives = 113/200 (56.50%), Query Frame = 3
Query:   27 WAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQN-LVKCAESCMYTPVYRNYR 623
            W  E E ++ LLD +   KPT+LIG SG    F++E+I+AM +  E+P+I  LSNPTS+ E T ++   W+KG+A+ A+GSPF+P     + +   Q NN+YIFPG GLG++ SGA RV ++ML+A+S ALA+        +G + P   +I                E G A  LP     L++  E   +T  YR Y+
Sbjct:  362 WNTESENIS-LLDVMHNGKPTVLIGVSGAPGLFSEEIIKAMHTHCERPIIFPLSNPTSRVEATPKDILHWTKGQALVATGSPFEPVVIEEQTYEIAQCNNSYIFPGIGLGVLASGAKRVSNEMLMASSRALAECSPLAKDGEGSLLPALEDIHSVSKHIAFAVGKVAIEQGHA--LPASDELLMQAIEDNFWTAEYRRYK 558          
The following BLAST results are available for this feature:
BLAST of FC872382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHESR1.061e-2938.74NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESM1.061e-2938.74NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_PSYCK1.385e-2936.45NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO2_BACSU1.809e-2934.85Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MAO1_ERWT91.809e-2938.95NAD-dependent malic enzyme OS=Erwinia tasmaniensis... [more]
MAO1_SHEB82.363e-2939.27NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB22.363e-2939.27NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHESH3.086e-2939.27NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_SHESA3.086e-2938.74NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHELP3.086e-2938.50NAD-dependent malic enzyme OS=Shewanella loihica (... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BB06ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872382 ID=FC872382; Name=FC872382; organism=Citrus clementina; type=EST; length=821bp
GGGCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTC
AACAATCTCTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGG
ATCATCTGGAGTTGGAAGAACTTTTACAAAAGAAGTAATCGAGGCCATGG
CCTCCTTCAATGAGAAACCTCTCATCCTGGCTCTCTCCAACCCAACCTCA
CAGTCAGAATGTACAGCTGAAGAAGCTTACACTTGGAGTAAGGGTCGTGC
AATTTTCGCTAGTGGAAGTCCATTTGATCCTTTTGAATACAATGGAAAAG
TTTTTGTTCCTGGCCAGGCCAACAATGCTTACATCTTCCCTGGATTTGGT
TTGGGTTTGGTCATCTCTGGAGCAATTCGGGTACATGACGACATGCTTCT
GGCAGCCTCGGAAGCCTTGGCAAAACAAGTGACAGAAGAGAACTTTGAGA
AGGGATTGATCTACCCACCATTTTCTAATATTAGAAAAATTTCAGCCAAT
ATAGCTGCTAATGTTGCTGCTAAGGCATATGAACTAGGCGTGGCTACGCG
TCTCCCTCGACCTCAGAATCTAGTGAAGTGCGCTGAAAGTTGCATGTATA
CCCCTGTCTACCGAAACTATCGTTAAATGTTCTGCCAAAATTTCTGTCTC
CGCTGAGTGTCTTTAAGCAAAAATAATGTCAAATAACTTGTTTTGGTGTG
TTATGGTGGCTTTTGTGCTTGTGTAAGTATTGCTGTATATGTGTACTTAT
CAAATGAAGGTGTTGGACCACTGCCTACATGGTTGAAGAATAGGAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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