FC872390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25 Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 2 Query: 26 KEVQREKSAD-PDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE QR + P I+ D+SN + +I GP +P+EGG F+L +PE+YP+ P+VRF+TKI+HPNV K G ICLDILK+ WSPA +++V +I AL++ P PD PL D ++ + + ++ AR +TRL AM Sbjct: 10 KETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVD-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIET-ARAWTRLYAM 149
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25 Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 2 Query: 26 KEVQREKSAD-PDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE QR + P I+ D+SN + +I GP +P+EGG F+L +PE+YP+ P+VRF+TKI+HPNV K G ICLDILK+ WSPA +++V +I AL++ P PD PL D ++ + + ++ AR +TRL AM Sbjct: 10 KETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVD-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIET-ARAWTRLYAM 149
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25 Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 2 Query: 26 KEVQREKSAD-PDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE QR + P I+ D+SN + +I GP +P+EGG F+L +PE+YP+ P+VRF+TKI+HPNV K G ICLDILK+ WSPA +++V +I AL++ P PD PL D ++ + + ++ AR +TRL AM Sbjct: 10 KETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVD-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIET-ARAWTRLYAM 149
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25 Identity = 61/150 (40.67%), Postives = 92/150 (61.33%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQLVCDDS--NIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 R + KE KE+QR DP + + ++F W A I GP+++PY GGVF + P YP +PP+V F TK+FHPN++ G ICLDILK+ WSPA T+ V +I +L+ P PD PL + ++ ++ D +++MAR +T+ A+ Sbjct: 4 RRILKELKELQR----DPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNIN-SNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKT-DKTKYEAMARSWTQKYAL 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.330e-25 Identity = 58/146 (39.73%), Postives = 90/146 (61.64%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE K++Q++ ++ V +D +F W A I GP ++PY GGVF ++ P YP +PP+V F TK++HPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ ++ D ++S AR +T+ AM Sbjct: 6 ILKELKDLQKDPPSNCSAGPVAED--MFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRSKYESTARSWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.349e-25 Identity = 58/146 (39.73%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE K++Q++ V +D +F W A I GP+++PY GGVF + P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ ++ D +++ AR +T+ AM Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYEATARNWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.349e-25 Identity = 62/141 (43.97%), Postives = 91/141 (64.54%), Query Frame = 2 Query: 26 KEVQREKSAD-PDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 445 KE QR S P I + N+ + +I GP+++PYEGGVF+L +PE+YP+ P+VRFLTKI+HPN+ K G ICLDILK+ WSPA +++V +I AL++ P PD PL+ + +S + ++ A+ +TRL A Sbjct: 12 KETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVET-AKEWTRLYA 150
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.680e-25 Identity = 58/146 (39.73%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE K++Q++ V +D +F W A I GP+ +PY GGVF ++ P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ ++ D +++ AR +T+ AM Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYETTARSWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 7.419e-25 Identity = 60/144 (41.67%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 17 KEYKEVQR-EKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 445 +E+KEV + E+++ I++ D N + I GP TPYEGG +QL +PE YP PP+VRF+TKI+HPN+ TG ICLDILK+ W+ A TL++V ++ AL+A EPD P + N + F+ AR++ + A Sbjct: 11 REFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNP-EMFKQTARLWAHVYA 153
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 7.419e-25 Identity = 60/144 (41.67%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 17 KEYKEVQR-EKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 445 +E+KEV + E+++ I++ D N + I GP TPYEGG +QL +PE YP PP+VRF+TKI+HPN+ TG ICLDILK+ W+ A TL++V ++ AL+A EPD P + N + F+ AR++ + A Sbjct: 11 REFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNP-EMFKQTARLWAHVYA 153 The following BLAST results are available for this feature:
BLAST of FC872390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872390 ID=FC872390; Name=FC872390; organism=Citrus clementina; type=EST; length=793bpback to top |