FC872390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 7.419e-25 Identity = 60/144 (41.67%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 17 KEYKEVQR-EKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 445 +E+KEV + E+++ I++ D N + I GP TPYEGG +QL +PE YP PP+VRF+TKI+HPN+ TG ICLDILK+ W+ A TL++V ++ AL+A EPD P + N + F+ AR++ + A Sbjct: 11 REFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNP-EMFKQTARLWAHVYA 153
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.419e-25 Identity = 62/141 (43.97%), Postives = 90/141 (63.83%), Query Frame = 2 Query: 26 KEVQREKSAD-PDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 445 KE QR S P I + N+ + +I GP+++PYEGGVF+L +PE+YP+ P+VRFLTKI+HPN+ K G ICLDILK+ WSPA +++V +I AL++ P PD PL+ + +S + + A+ +TRL A Sbjct: 12 KETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDT-AKEWTRLYA 150
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.419e-25 Identity = 52/128 (40.62%), Postives = 85/128 (66.41%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 388 R L +++K +Q++ + + D N+ KW A+I GPS TP+E G F+L + EQYP +PPQV+F++++FHPNV + +GE+CLDIL+N WSP + + S+ ++ +L+ P SP N ++ NL + Sbjct: 7 RRLMRDFKRMQQDPPSGVSASPLPD--NVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNV-YASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYK 131
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.265e-24 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++QR+ A V DD +F W A I GP+ +PY+GGVF L P YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + +AR +T+ AM Sbjct: 8 KELTDLQRDPPAQCSAGPVGDD--LFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKA-DREKYNRLAREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24 Identity = 54/128 (42.19%), Postives = 82/128 (64.06%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 388 R L +++K +Q + A V D N+ W A+I GP+ TP+E G F+L EQYP +PPQV+F++++FHPNV + TGE+CLDIL+N WSP + + +V +I +L+ P SP N ++ NL + Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVPD--NVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEMFHPNV-YATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYK 131
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.158e-24 Identity = 59/144 (40.97%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE +++ R+ A V DD +F W A I GP +PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + +AR +TR AM Sbjct: 8 KELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DREKYNELAREWTRKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBCX_PICPA (Ubiquitin-conjugating enzyme E2-24 kDa OS=Pichia pastoris GN=PEX4 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.819e-24 Identity = 62/185 (33.51%), Postives = 93/185 (50.27%), Query Frame = 2 Query: 11 LFKEYKEV---QREKSADP--------DIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLT----------------------------------KIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMY 430 L +EY+ + QR+K + D++ V +D N +KWTA +KGP+ T Y+ ++L +P YP QPP+ F+ ++ HPN+ F TGEICLDIL+ W+PAWTL S AI+ L+ PEP SPL+ D NL++ D++ + S+ Y Sbjct: 7 LLQEYRSILKEQRQKGSASTLSSNGILDLKPVSED-NFYKWTAKLKGPTDTGYQDAFWELQIDIPSNYPTQPPKFTFIVSDDIPRNRRQRQTNQIQDDDEFEGAEKEVLRHCYRMPHPNIAFNTGEICLDILQAKWTPAWTLSSALTAIVLLLNDPEPLSPLDIDMANLMKINDLKAYNSLIEYY 190
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.682e-24 Identity = 56/148 (37.84%), Postives = 93/148 (62.84%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 R + KE + + +E P I + D++N + ++ GP+ +P+EGGVF+L +PE YP+ P+VRF+TKI+HPN+ + G ICLD+LK+ WSPA ++++ +I AL++ P PD PL D L + + ++ AR +T+ A+ Sbjct: 6 RRIIKETQRLMQEPV--PGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNID-RLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRN-AREWTQKYAV 149
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.682e-24 Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 388 R L +++K +Q + A V D N+ W A+I GP+ TP+E G F+L EQYP +PP V+F++++FHPNV + TGE+CLDIL+N WSP + + ++ +I +L+ P SP N ++ NL R Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVAD--NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNV-YGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYR 131
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.682e-24 Identity = 58/144 (40.28%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE +++ R+ A V DD +F W A I GP ++PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + +AR +T+ AM Sbjct: 8 KELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DRERYNQLAREWTQKYAM 147 The following BLAST results are available for this feature:
BLAST of FC872390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872390 ID=FC872390; Name=FC872390; organism=Citrus clementina; type=EST; length=793bpback to top |