FC872390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 39/116 (33.62%), Postives = 56/116 (48.28%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTG-EICL---DILKNAWSPAWTLQSVCRAIIALMAHPE 346 L KEYK + + P I + NI +W +I GP TPYE G + P YP PP +R +T PN FK +CL D AW+PAW++ ++ +++ M E Sbjct: 10 LTKEYKNIVN--NPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMIT----PNGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMTGDE 119
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 42/120 (35.00%), Postives = 62/120 (51.67%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTG-EICLDILK---NAWSPAWTLQSVCRAIIALMAHPEPDSP 358 + +E KE+Q S D + + NIF+W I+GP T +EGG++ +P YP +PP LT PN F+T +ICL I W P+W++++ A+IA M P SP Sbjct: 16 ILQEVKEMQANPS--DDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLT----PNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFM----PTSP 125
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.095e-11 Identity = 33/85 (38.82%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 86 NIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKI-FHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMA 337 N+ +W + G T Y +QL PE YP++ PQV FL HP++ + G ICLDIL ++WSPA T+ S+C +I+++++ Sbjct: 42 NLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHI-YSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.095e-11 Identity = 31/87 (35.63%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 119 PSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGN 379 P + Y+GG F+ +F V +P +PP+V+ L K++HPN+ + G +CL+IL+ W P +L +V + L P PLN D+ + Sbjct: 61 PDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLE-GNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAH 146
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.574e-11 Identity = 35/108 (32.41%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 80 DSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIR 403 D N + IK P Y GG + + + YP++PP V+ + +I+HPN+ G +CL++L+ W+PA +QS+ I+ L P PLN D+ L +R Sbjct: 55 DENPMRVNLAIK-PDIGYYAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDID-GNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAKTLIEDPLR 160
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11 Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF--HPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMA 337 L KE +Q + + ++I +W ++G T YEG FQL F +YP PQV F + HP+V + G ICL IL WSPA ++QSVC +II++++ Sbjct: 8 LQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHV-YSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11 Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF--HPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMA 337 L KE +Q + + ++I +W ++G T YEG FQL F +YP PQV F + HP+V + G ICL IL WSPA ++QSVC +II++++ Sbjct: 8 LQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV-YSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11 Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTG-EICL---DILKNAWSPAWTLQSVCRAIIALMAHPE 346 L KEYK + ++ P I ++ NI +W +I GP+ TPY+GG + P YP +PP +R +T PN FK +CL D + W+P W++ ++ +++ M E Sbjct: 10 LTKEYKLMV--ENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMIT----PNGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFMTSDE 119
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11 Identity = 31/90 (34.44%), Postives = 47/90 (52.22%), Query Frame = 2 Query: 119 PSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 388 P Y G F F V YP + P+V+ TK++HPN+ + G +CL+IL+ W P + +V + L P + PLN D+ +LR Sbjct: 68 PDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLE-GNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLR 156 The following BLAST results are available for this feature:
BLAST of FC872390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872390 ID=FC872390; Name=FC872390; organism=Citrus clementina; type=EST; length=793bpback to top |