FC872390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBCX_YEAST (Ubiquitin-conjugating enzyme E2-21 kDa OS=Saccharomyces cerevisiae GN=PEX4 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.809e-24 Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLV----------CDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFL-TKIFHPNVHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMY 430 + KEYK + + ++D I D++++ KW A+I GPS TPYE F++ VP YP+ PP++ F+ I H NV TGEICL+ILK W+P W L A+ L+ P DSPL+ D GN++R GD+ +Q + + + Sbjct: 22 IVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYF 173
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE ++ R+ A V DD +F W A I GP+ +PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + +AR +T+ AM Sbjct: 6 IHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DREKYNRIAREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE ++ R+ A V DD +F W A I GP+ +PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + +AR +T+ AM Sbjct: 6 IHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DREKYNRIAREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE ++ R+ A V DD +F W A I GP+ +PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + +AR +T+ AM Sbjct: 6 IHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DREKYNRIAREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE ++ R+ A V DD +F W A I GP+ +PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + +AR +T+ AM Sbjct: 6 IHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DREKYNRIAREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE ++ R+ A V DD +F W A I GP+ +PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + +AR +T+ AM Sbjct: 6 IHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DREKYNRIAREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.202e-24 Identity = 52/128 (40.62%), Postives = 81/128 (63.28%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 388 R L +++K +Q + A + D N+ W A+I GP+ TP+E G F+L EQYP +PPQV+F++++FHPNV + GE+CLDIL+N WSP + + +V +I +L+ P SP N ++ NL + Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPIPD--NVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHPNV-YANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYK 131
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.202e-24 Identity = 52/128 (40.62%), Postives = 81/128 (63.28%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 388 R L +++K +Q + A V D N+ W A+I GP+ TP+E G F+L EQYP +PP V+F++++FHPNV + TGE+CLDIL+N WSP + + ++ +I +L+ P SP N ++ NL + Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVAD--NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNV-YGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYK 131
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.202e-24 Identity = 60/144 (41.67%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++QR+ A V DD +F W A I GP + Y+GGVF L P YP +PP++ F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL D + +S D + AR +T+ AM Sbjct: 8 KELSDLQRDPPAHCSAGPVGDD--LFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKS-DKEKYNRHAREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.202e-24 Identity = 60/144 (41.67%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++QR+ A V DD +F W A I GP + Y+GGVF L P YP +PP++ F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL D + +S D + AR +T+ AM Sbjct: 8 KELSDLQRDPPAHCSAGPVGDD--LFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKS-DKEKYNRHAREWTQKYAM 147 The following BLAST results are available for this feature:
BLAST of FC872390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872390 ID=FC872390; Name=FC872390; organism=Citrus clementina; type=EST; length=793bpback to top |