FC872390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.202e-24 Identity = 60/144 (41.67%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++QR+ A V DD +F W A I GP + Y+GGVF L P YP +PP++ F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL D + +S D + AR +T+ AM Sbjct: 8 KELSDLQRDPPAHCSAGPVGDD--LFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKS-DKEKYNRHAREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQL--VCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 382 R L +++K +Q DP + + ++NI +W A+I GP TP+E G F+L E+YP +PP VRFL+K+FHPNV + G ICLDIL+N WSP + + S+ +I +L+ P P+SP N + L Sbjct: 7 RRLMRDFKRLQE----DPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQL--VCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 382 R L +++K +Q DP + + ++NI +W A+I GP TP+E G F+L E+YP +PP VRFL+K+FHPNV + G ICLDIL+N WSP + + S+ +I +L+ P P+SP N + L Sbjct: 7 RRLMRDFKRLQE----DPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQL--VCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 382 R L +++K +Q DP + + ++NI +W A+I GP TP+E G F+L E+YP +PP VRFL+K+FHPNV + G ICLDIL+N WSP + + S+ +I +L+ P P+SP N + L Sbjct: 7 RRLMRDFKRLQE----DPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQL--VCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 382 R L +++K +Q DP + + ++NI +W A+I GP TP+E G F+L E+YP +PP VRFL+K+FHPNV + G ICLDIL+N WSP + + S+ +I +L+ P P+SP N + L Sbjct: 7 RRLMRDFKRLQE----DPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQL--VCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 382 R L +++K +Q DP + + ++NI +W A+I GP TP+E G F+L E+YP +PP VRFL+K+FHPNV + G ICLDIL+N WSP + + S+ +I +L+ P P+SP N + L Sbjct: 7 RRLMRDFKRLQE----DPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 55/144 (38.19%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE +++QR+ DD +F+W A I GP+ +P+ GGVF + P YP +PP+V F TK++HPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ ++ ++ ++S A+ +T+ AM Sbjct: 8 KELRDLQRDPPVSCSAGPTGDD--MFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNIN-SNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVK-YESTAQSWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 60/146 (41.10%), Postives = 89/146 (60.96%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCD-SGNLLRSGDIRGFQSMARMYTRLAA 445 + KE + V+ + +A ++ V +S+I GP TPYEGG F + VP +YP +PP+++F TK++HPN+ TG ICLDILKNAWSP TL+S ++ AL+ PEP+ P + + + + LR D F A ++TRL A Sbjct: 7 IMKEIQAVKDDPAAHITLEFV-SESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLR--DRESFNKTAALWTRLYA 149
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.399e-23 Identity = 50/119 (42.02%), Postives = 77/119 (64.71%), Query Frame = 2 Query: 77 DDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYT 433 + +NI++WTA+I+GP TPYEGG+F L+ P YP +PP+ F T I+HPN++ G IC++ILK+ W+PA ++ V +I+ L+ P PD PL + G L ++ + F AR +T Sbjct: 32 NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNIN-DEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQ-FDQRAREFT 148
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.827e-23 Identity = 57/144 (39.58%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++ R+ + V +D +F W A I GPS +PY GGVF LA P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +++ P PD PL + ++ ++ + ++S AR +TR A+ Sbjct: 8 KELTDLGRDPPSSCSAGPVGED--LFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNIN-SNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQ-YESTAREWTRKYAI 147 The following BLAST results are available for this feature:
BLAST of FC872390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872390 ID=FC872390; Name=FC872390; organism=Citrus clementina; type=EST; length=793bpback to top |