FC872390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.117e-23 Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++ R+ A V DD +F W A I GP+ +PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + ++R +T+ AM Sbjct: 8 KELSDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DRDKYNRISREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.117e-23 Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++ R+ A V DD +F W A I GP+ +PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + ++R +T+ AM Sbjct: 8 KELSDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DRDKYNRISREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.117e-23 Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++ R+ A V DD +F W A I GP+ +PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + ++R +T+ AM Sbjct: 8 KELSDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DRDKYNRISREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.117e-23 Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++ R+ A V DD +F W A I GP+ +PY+GGVF L P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL + + ++ D + ++R +T+ AM Sbjct: 8 KELSDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DRDKYNRISREWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.071e-23 Identity = 58/144 (40.28%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++ R+ A V DD ++ W A I GPS +PY GGVF L+ P YP +PP+V F TKI+HPN++ +G ICLDILK+ WSPA TL V +I +L+ PD PL + + ++ D +++ A+ +T+ A+ Sbjct: 9 KELSDLGRDPPASCSAGPVGDD--LYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNIN-SSGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYKT-DKAKYEATAKEWTKKYAV 148
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.071e-23 Identity = 49/124 (39.52%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 382 L +++K +Q++ A I D+NI W A+I GP TP++GG F+L+ E YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP N ++ + Sbjct: 9 LMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARM 129
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.071e-23 Identity = 56/144 (38.89%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 17 KEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE ++ R+ + V +D +F W A I GP +PY GGVF LA P YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +++ P PD PL + ++ ++ R +++ AR +TR A+ Sbjct: 8 KELTDLGRDPPSSCSAGPVGED--LFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNIN-SNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRAR-YEATAREWTRKYAI 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.071e-23 Identity = 49/124 (39.52%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 382 L +++K +Q++ A I D+NI W A+I GP TP++GG F+L+ E YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP N ++ + Sbjct: 9 LMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARM 129
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.316e-23 Identity = 51/128 (39.84%), Postives = 79/128 (61.72%), Query Frame = 2 Query: 5 RGLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 388 R L +++K +Q + + D+NI W A+I GP TP+E G F+L E+YP +PP VRF++K+FHPNV + G ICLDIL+N WSP + + ++ +I +L++ P P+SP N + L + Sbjct: 7 RRLMRDFKRLQEDPPTG--VSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNV-YADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYK 131
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.316e-23 Identity = 49/124 (39.52%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 382 L +++K +Q + A I D+NI W A+I GP TP++GG F+L+ E YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP N ++ + Sbjct: 9 LMRDFKRLQHDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARM 129 The following BLAST results are available for this feature:
BLAST of FC872390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872390 ID=FC872390; Name=FC872390; organism=Citrus clementina; type=EST; length=793bpback to top |