FC872422

Overview
NameFC872422
Unique NameFC872422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC872422_ssr779 microsatellite FC872422_ssr779:779..790. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433T_BOVIN (14-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.598e-54
Identity = 105/170 (61.76%), Postives = 132/170 (77.65%), Query Frame = 2
Query:   14 NELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            ++  ++ IK+YR+KVE+EL  I T +++++D++LI + T  ES VFY KMKGDY+RYLA    GD+RK   D S  AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD   +  D A+
Sbjct:   72 SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAE 241          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433Z_XENLA (14-3-3 protein zeta OS=Xenopus laevis GN=ywhaz PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 4.699e-54
Identity = 107/172 (62.21%), Postives = 130/172 (75.58%), Query Frame = 2
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 526
            G E   +  +EYR+K+EAEL +I  D++ ++D+ LI + T  ES VFY KMKGDYYRYLA    G+ +  +   S KAYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+N P++AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA++
Sbjct:   71 GAEKKQEMSREYREKIEAELREICNDVLNLLDKFLIANATQPESKVFYLKMKGDYYRYLAEVAAGNAKTEIVGQSQKAYQDAFDISKTEMQPTHPIRLGLALNFSVFYYEILNCPDKACALAKAAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAEQ 239          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433T_XENLA (14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.047e-53
Identity = 104/170 (61.18%), Postives = 132/170 (77.65%), Query Frame = 2
Query:   14 NELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            ++  ++ IK+YR+KVE+EL  I T +++++D++LI + T  ES VFY KMKGDY+RYLA    GD+RK   + S  AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD   +  D A+
Sbjct:   72 SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAE 241          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433T_RAT (14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.047e-53
Identity = 104/170 (61.18%), Postives = 132/170 (77.65%), Query Frame = 2
Query:   14 NELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            ++  ++ IK+YR+KVE+EL  I T +++++D++LI + T  ES VFY KMKGDY+RYLA    GD+RK   + S  AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD   +  D A+
Sbjct:   72 SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAE 241          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433T_RABIT (14-3-3 protein theta OS=Oryctolagus cuniculus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.047e-53
Identity = 104/170 (61.18%), Postives = 132/170 (77.65%), Query Frame = 2
Query:   14 NELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            ++  ++ IK+YR+KVE+EL  I T +++++D++LI + T  ES VFY KMKGDY+RYLA    GD+RK   + S  AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD   +  D A+
Sbjct:   72 SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAE 241          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433T_MOUSE (14-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.047e-53
Identity = 104/170 (61.18%), Postives = 132/170 (77.65%), Query Frame = 2
Query:   14 NELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            ++  ++ IK+YR+KVE+EL  I T +++++D++LI + T  ES VFY KMKGDY+RYLA    GD+RK   + S  AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD   +  D A+
Sbjct:   72 SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAE 241          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433T_CHICK (14-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.047e-53
Identity = 104/170 (61.18%), Postives = 132/170 (77.65%), Query Frame = 2
Query:   14 NELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            ++  ++ IK+YR+KVE+EL  I T +++++D++LI + T  ES VFY KMKGDY+RYLA    GD+RK   + S  AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD   +  D A+
Sbjct:   72 SDKKMQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAE 241          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 143B2_ONCMY (14-3-3 protein beta/alpha-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.785e-53
Identity = 107/184 (58.15%), Postives = 134/184 (72.83%), Query Frame = 2
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGED 562
            GNE      KEYR+K+E EL  I  D++ ++D++LI + T  ES VFY KMKGDYYRYL+    GD +K   D S +AYQ A   ++ E+ PTHPIRLGLALNFSVF+YEI+N+PE+AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLL+ +LTLWTS   E+ GDE +        GEGE+
Sbjct:   71 GNEKKQAMAKEYREKIETELQDICNDVLGLLDKYLIANATAAESKVFYLKMKGDYYRYLSEVAAGDAKKTTVDNSQQAYQDAFDISKKEMQPTHPIRLGLALNFSVFFYEILNNPEKACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLKGHLTLWTS---ENQGDEGE-------TGEGEN 244          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 143B2_DANRE (14-3-3 protein beta/alpha-2 OS=Danio rerio GN=ywhab2 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.332e-53
Identity = 103/170 (60.59%), Postives = 131/170 (77.06%), Query Frame = 2
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEA 520
            GNE   +  +EYR+K+E EL  I +D++ +++++LI + +  ES VFY KMKGDYYRYL+   +GD +    + S KAYQ A   ++ ++ PTHPIRLGLALNFSVFYYEI+NSPE AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTS   E+ G+EA
Sbjct:   71 GNEKKQQMAREYREKIETELQDICSDVLGLLEKYLIANASQAESKVFYLKMKGDYYRYLSEVASGDSKATTVENSQKAYQDAFDISKKDMQPTHPIRLGLALNFSVFYYEILNSPENACQLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS---ENQGEEA 237          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14333_ENTHI (14-3-3 protein 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.978e-53
Identity = 101/167 (60.48%), Postives = 131/167 (78.44%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPED 505
            A+GN+  V+ IK YR K+E EL+K   D+++VI E+L+P+ +  ES VFY KM+GDYYRY A F   ++R+ VAD S+ AY  A+  + A+L+PTHPIRLGLALNFSVFYYEIMN  ++AC LAKQAFD++I++LD + E SYKDSTLIMQLLRDNLTLWTSD  ++
Sbjct:   69 AKGNDKHVEIIKGYRAKIEDELAKYCDDVLKVIKENLLPNASTSESKVFYKKMEGDYYRYYAEFTVDEKRQEVADKSLAAYTEATEISNADLAPTHPIRLGLALNFSVFYYEIMNDADKACQLAKQAFDDSIAKLDEVPESSYKDSTLIMQLLRDNLTLWTSDTADE 235          
The following BLAST results are available for this feature:
BLAST of FC872422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433T_BOVIN3.598e-5461.7614-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 S... [more]
1433Z_XENLA4.699e-5462.2114-3-3 protein zeta OS=Xenopus laevis GN=ywhaz PE=... [more]
1433T_XENLA1.047e-5361.1814-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE... [more]
1433T_RAT1.047e-5361.1814-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq... [more]
1433T_RABIT1.047e-5361.1814-3-3 protein theta OS=Oryctolagus cuniculus GN=Y... [more]
1433T_MOUSE1.047e-5361.1814-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1... [more]
1433T_CHICK1.047e-5361.1814-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=... [more]
143B2_ONCMY1.785e-5358.1514-3-3 protein beta/alpha-2 OS=Oncorhynchus mykiss... [more]
143B2_DANRE2.332e-5360.5914-3-3 protein beta/alpha-2 OS=Danio rerio GN=ywha... [more]
14333_ENTHI3.978e-5360.4814-3-3 protein 3 (Fragment) OS=Entamoeba histolyti... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BE04ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872422 ID=FC872422; Name=FC872422; organism=Citrus clementina; type=EST; length=819bp
GGGGGCCAGAGGGAATGAACTTAGTGTGAAAAGAATTAAAGAGTATAGGC
AAAAGGTAGAAGCTGAGCTGTCCAAGATCAGCACTGATATTATGCAAGTC
ATTGATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGTGTT
TTACTATAAAATGAAAGGTGATTATTATCGGTACTTGGCATAGTTTAAGA
CTGGTGATGAAAGGAAAAATGTTGCTGATCTGTCAATGAAAGCCTATCAG
GCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCATCCG
ACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGAACT
CTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCCATC
TCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTTGAT
AATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATACCAG
AGGATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAGATGGT
GAAGGCGAAGATTGAAGAAGCAGAGTGAACCAGCCAGGAGCTTGGGAGCT
CTAGCATATGATAGCAAGGAAGCTGCAATACCTTTATGACTCCCGGTGTT
TTTCTTAGTTTACAAGAGACACTCAAGTACTGTTATTGTGCTGTTCCTAT
AATGTGGGTGTTATCTTCACTGTCAAGAGTTTCATGATTGGACTGCTTGT
ATCATTTGCATCCCAGAATCTTTTATATCTGCTGCTGCTGATCAAAAAAA
AAAAAAAAAAAAAAAAAAA
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