FC872422

Overview
NameFC872422
Unique NameFC872422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433F_HUMAN (14-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 SV=4)

HSP 1 Score: 207.608 bits (527), Expect = 6.785e-53
Identity = 101/173 (58.38%), Postives = 133/173 (76.88%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGG--ESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            A GNE  ++++K YR+K+E EL  +  D++ ++D+ LI +C     ES VFY KMKGDYYRYLA   +G+++ +V + S  AY+ A   ++ ++ PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  ++   E
Sbjct:   72 ADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433F_RAT (14-3-3 protein eta OS=Rattus norvegicus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.511e-52
Identity = 101/173 (58.38%), Postives = 132/173 (76.30%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGG--ESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            A GNE  ++++K YR+K+E EL  +  D++ ++D+ LI +C     ES VFY KMKGDYYRYLA   +G+++ +V + S  AY+ A   ++  + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  ++   E
Sbjct:   72 ADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433F_MOUSE (14-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.511e-52
Identity = 101/173 (58.38%), Postives = 132/173 (76.30%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGG--ESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            A GNE  ++++K YR+K+E EL  +  D++ ++D+ LI +C     ES VFY KMKGDYYRYLA   +G+++ +V + S  AY+ A   ++  + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  ++   E
Sbjct:   72 ADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433F_BOVIN (14-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.511e-52
Identity = 101/173 (58.38%), Postives = 132/173 (76.30%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGG--ESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            A GNE  ++++K YR+K+E EL  +  D++ ++D+ LI +C     ES VFY KMKGDYYRYLA   +G+++ +V + S  AY+ A   ++  + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  ++   E
Sbjct:   72 ADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52
Identity = 101/163 (61.96%), Postives = 126/163 (77.30%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 493
            A+GN+  V+ IK YR K+E ELS    D+++VI E+L+P  +  ES VF+ KM+GDYYRY A F   ++RK VAD S+ AY  A+  + AEL+PTHPIRLGLALNFSVFY+EIMN  ++AC LAKQAFD+AI++LD + E  YKDSTLIMQLLRDNLTLWTSD
Sbjct:   72 AKGNDKHVEIIKGYRAKIEKELSTCCDDVLKVIQENLLPKASTSESKVFFKKMEGDYYRYFAEFTVDEKRKEVADKSLAAYTEATEISNAELAPTHPIRLGLALNFSVFYFEIMNDADKACQLAKQAFDDAIAKLDEVPENMYKDSTLIMQLLRDNLTLWTSD 234          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14331_CAEEL (14-3-3-like protein 1 OS=Caenorhabditis elegans GN=par-5 PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52
Identity = 108/175 (61.71%), Postives = 130/175 (74.29%), Query Frame = 2
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI-----PEDGGDEA 520
            G+E   +  KEYR KVE EL+ I  D+++++DE LI      ES VFY KMKGDYYRYLA   + D R  V + S KAYQ A   A+ ++ PTHPIRLGLALNFSVFYYEI+N+PE AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+      ++G  EA
Sbjct:   73 GSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKVFYLKMKGDYYRYLAEVASED-RAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDVGAEDQEQEGNQEA 246          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14332_ENTHI (14-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.744e-52
Identity = 104/167 (62.28%), Postives = 129/167 (77.25%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPED 505
            A+GN   V+ IK YR K+E ELS+   D++++I E L+ + T  ES VF+ KM+GDYYRY A F   ++RK VAD S+ AYQ A+ TA A L PTHPIRLGLALNFSVFYY+IMN  ++AC LAK+AFDEAI +LD + EESYK+STLIMQLLRDNLTLWTSD+ +D
Sbjct:   72 AKGNTQRVELIKTYRAKIEQELSQKCDDVLKIITEFLLKNSTSIESKVFFKKMEGDYYRYYAEFTVDEKRKEVADKSLAAYQEATDTA-ASLVPTHPIRLGLALNFSVFYYQIMNDADKACQLAKEAFDEAIQKLDEVPEESYKESTLIMQLLRDNLTLWTSDMGDD 237          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433_NEOCA (14-3-3 protein homolog OS=Neospora caninum PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 9.797e-52
Identity = 97/155 (62.58%), Postives = 123/155 (79.35%), Query Frame = 2
Query:   41 EYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPED 505
            EYRQKVE EL+KI  DI+Q++ + LIP  +  ES VFYYKMKGDYYRY++ F   + +K  AD + ++YQ A+ TAE     THPIRLGLALN+SVF+YEI+N P++AC +AK+AFD+AI+E D +SE+SYKDSTLIMQLLRDNLTLWTSD+  D
Sbjct:   96 EYRQKVEEELNKICHDILQLLTDKLIPKTSDSESKVFYYKMKGDYYRYISEFSGEEGKKQAADQAQESYQKATETAEGHSPATHPIRLGLALNYSVFFYEILNLPQQACEMAKRAFDDAITEFDNVSEDSYKDSTLIMQLLRDNLTLWTSDLQAD 250          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433_EIMTE (14-3-3 protein OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.415e-50
Identity = 102/185 (55.14%), Postives = 136/185 (73.51%), Query Frame = 2
Query:    5 ARGNELSVKRIK-EYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI--------PEDGGDEAQKMD 532
            A  N ++ K +   YRQKVE EL+KI  +I+ ++ + L+P  T  ES VFY+KMKGDYYRY++ F   + +K  A+ + ++Y+ A+ TAEAEL  THPIRLGLALN+SVFYYEI+N P++AC +AK AFD+AI+E D++SE+SYKDSTLIMQLLRDNLTLWTSD+        P   G EA K++
Sbjct:   88 ANRNHMANKALAASYRQKVENELNKICQEILTLLTDKLLPRTTDSESRVFYFKMKGDYYRYISEFSNEEGKKASAEQAEESYKRATDTAEAELPSTHPIRLGLALNYSVFYYEILNQPQKACEMAKLAFDDAITEFDSVSEDSYKDSTLIMQLLRDNLTLWTSDLQTQEQQQQPVGEGAEAPKVE 272          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433S_MOUSE (14-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.415e-50
Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 2
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEA 520
            G+E     +KEYR+KVE EL  +   ++ ++D HLI      ES VFY KMKGDYYRYLA   TGD++K + D +  AYQ A   ++ E+ PT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+++L TLSE+SYKDSTLIMQLLRDNLTLWT+D   + G EA
Sbjct:   73 GSEEKGPEVKEYREKVETELRGVCDTVLGLLDSHLIKGAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADSAGEEGGEA 242          
The following BLAST results are available for this feature:
BLAST of FC872422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433F_HUMAN6.785e-5358.3814-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 S... [more]
1433F_RAT1.511e-5258.3814-3-3 protein eta OS=Rattus norvegicus GN=Ywhah P... [more]
1433F_MOUSE1.511e-5258.3814-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 S... [more]
1433F_BOVIN1.511e-5258.3814-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=... [more]
14331_ENTHI1.974e-5261.9614-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=... [more]
14331_CAEEL1.974e-5261.7114-3-3-like protein 1 OS=Caenorhabditis elegans GN... [more]
14332_ENTHI5.744e-5262.2814-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=... [more]
1433_NEOCA9.797e-5262.5814-3-3 protein homolog OS=Neospora caninum PE=2 SV... [more]
1433_EIMTE1.415e-5055.1414-3-3 protein OS=Eimeria tenella PE=2 SV=1[more]
1433S_MOUSE1.415e-5058.8214-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB1BE04ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872422 ID=FC872422; Name=FC872422; organism=Citrus clementina; type=EST; length=819bp
GGGGGCCAGAGGGAATGAACTTAGTGTGAAAAGAATTAAAGAGTATAGGC
AAAAGGTAGAAGCTGAGCTGTCCAAGATCAGCACTGATATTATGCAAGTC
ATTGATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGTGTT
TTACTATAAAATGAAAGGTGATTATTATCGGTACTTGGCATAGTTTAAGA
CTGGTGATGAAAGGAAAAATGTTGCTGATCTGTCAATGAAAGCCTATCAG
GCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCATCCG
ACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGAACT
CTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCCATC
TCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTTGAT
AATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATACCAG
AGGATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAGATGGT
GAAGGCGAAGATTGAAGAAGCAGAGTGAACCAGCCAGGAGCTTGGGAGCT
CTAGCATATGATAGCAAGGAAGCTGCAATACCTTTATGACTCCCGGTGTT
TTTCTTAGTTTACAAGAGACACTCAAGTACTGTTATTGTGCTGTTCCTAT
AATGTGGGTGTTATCTTCACTGTCAAGAGTTTCATGATTGGACTGCTTGT
ATCATTTGCATCCCAGAATCTTTTATATCTGCTGCTGCTGATCAAAAAAA
AAAAAAAAAAAAAAAAAAA
back to top