FC872422

Overview
NameFC872422
Unique NameFC872422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC872422_ssr779 microsatellite FC872422_ssr779:779..790. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433E_SHEEP (14-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.445e-63
Identity = 119/170 (70.00%), Postives = 139/170 (81.76%), Query Frame = 2 
Query:    8 RGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            +G E  +K I+EYRQ VE EL  I  DI+ V+D+HLIP+   GES VFYYKMKGDY+RYLA F TG++RK  A+ S+ AY+AAS  A  EL PTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD+  DG ++
Sbjct:   73 KGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQ 242
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433E_RAT (14-3-3 protein epsilon OS=Rattus norvegicus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.445e-63
Identity = 119/170 (70.00%), Postives = 139/170 (81.76%), Query Frame = 2 
Query:    8 RGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            +G E  +K I+EYRQ VE EL  I  DI+ V+D+HLIP+   GES VFYYKMKGDY+RYLA F TG++RK  A+ S+ AY+AAS  A  EL PTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD+  DG ++
Sbjct:   73 KGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQ 242
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433E_MOUSE (14-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.445e-63
Identity = 119/170 (70.00%), Postives = 139/170 (81.76%), Query Frame = 2 
Query:    8 RGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            +G E  +K I+EYRQ VE EL  I  DI+ V+D+HLIP+   GES VFYYKMKGDY+RYLA F TG++RK  A+ S+ AY+AAS  A  EL PTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD+  DG ++
Sbjct:   73 KGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQ 242
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433E_HUMAN (14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.445e-63
Identity = 119/170 (70.00%), Postives = 139/170 (81.76%), Query Frame = 2 
Query:    8 RGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            +G E  +K I+EYRQ VE EL  I  DI+ V+D+HLIP+   GES VFYYKMKGDY+RYLA F TG++RK  A+ S+ AY+AAS  A  EL PTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD+  DG ++
Sbjct:   73 KGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQ 242
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433E_CHICK (14-3-3 protein epsilon OS=Gallus gallus GN=YWHAE PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.445e-63
Identity = 119/170 (70.00%), Postives = 139/170 (81.76%), Query Frame = 2 
Query:    8 RGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            +G E  +K I+EYRQ VE EL  I  DI+ V+D+HLIP+   GES VFYYKMKGDY+RYLA F TG++RK  A+ S+ AY+AAS  A  EL PTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD+  DG ++
Sbjct:   73 KGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQ 242
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433E_BOVIN (14-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.445e-63
Identity = 119/170 (70.00%), Postives = 139/170 (81.76%), Query Frame = 2 
Query:    8 RGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            +G E  +K I+EYRQ VE EL  I  DI+ V+D+HLIP+   GES VFYYKMKGDY+RYLA F TG++RK  A+ S+ AY+AAS  A  EL PTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD+  DG ++
Sbjct:   73 KGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQ 242
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 2.104e-62
Identity = 115/174 (66.09%), Postives = 145/174 (83.33%), Query Frame = 2 
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 526
            +RGN+  V  I++YR K+E+ELSKI   I++++D  L+P+   G+S VFY KMKGDY+RYLA FKTG ERK+ A+ ++ AY+AA   A AEL+PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ ++  +E ++
Sbjct:   81 SRGNDDHVTTIRDYRSKIESELSKICDGILKLLDTRLVPASANGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDESPEEIKE 254
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 4.688e-62
Identity = 118/179 (65.92%), Postives = 140/179 (78.21%), Query Frame = 2 
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISA 541
            A+GNE  V  I++YR K+EAELSKI  DI+ V+ +HLI S   GES VFYYKMKGDY+RYLA F   ++RK  ADLS++AY+AAS  A  EL PTHPIRLGLALNFSVFYYEI+NSP+RACHLAKQAFD+A+++L+TLSE+SYKDSTLIMQLLRDNLTLWT         E Q+    A
Sbjct:   73 AKGNESQVALIRDYRAKIEAELSKICEDILSVLSDHLITSAQTGESKVFYYKMKGDYHRYLAEFAIAEKRKEAADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAVADLETLSEDSYKDSTLIMQLLRDNLTLWTDLSEAPAATEEQQQSSQA 251
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.688e-62
Identity = 122/186 (65.59%), Postives = 148/186 (79.57%), Query Frame = 2 
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGD-ERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGE 559
            +RGNE  V  IKEYR K+EAELSKI   I+ +++ HL+PS +  ES VFY KMKGDY+RYLA FKTG  ERK  A+ ++ AY++A   A AEL+PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD  +D  DE ++     + G+G+
Sbjct:   74 SRGNEDHVSSIKEYRVKIEAELSKICDGILSLLESHLVPSASTAESKVFYLKMKGDYHRYLAEFKTGARERKEAAENTLLAYKSAQDIALAELTPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTTDDAEDEIRE-GSKQESGDGQ 258
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 6.122e-62
Identity = 120/176 (68.18%), Postives = 143/176 (81.25%), Query Frame = 2 
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI-----PEDGGDE 517
            ++GNE  VK+IKEY+ KVE EL+ I  DI++V++ HLI S   GES VFYYKMKGDY+RYLA F TG+ RK  A+ S+ AY+AAS  A  EL PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAK AFD+AI+ELDTLSE+SYKDSTLIMQLLRDNLTLWTSD+      +DG D+
Sbjct:   71 SKGNENHVKKIKEYKCKVEKELTDICNDILEVLESHLIVSSASGESKVFYYKMKGDYFRYLAEFATGNPRKTSAESSLIAYKAASDIAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSDVHNMEKNQDGDDD 246
The following BLAST results are available for this feature:
BLAST of FC872422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433E_SHEEP9.445e-6370.0014-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1... [more]
1433E_RAT9.445e-6370.0014-3-3 protein epsilon OS=Rattus norvegicus GN=Ywh... [more]
1433E_MOUSE9.445e-6370.0014-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE... [more]
1433E_HUMAN9.445e-6370.0014-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE... [more]
1433E_CHICK9.445e-6370.0014-3-3 protein epsilon OS=Gallus gallus GN=YWHAE P... [more]
1433E_BOVIN9.445e-6370.0014-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2... [more]
14334_ARATH2.104e-6266.0914-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
1433_CANAL4.688e-6265.9214-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
14331_SOLTU4.688e-6265.5914-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
1433_DICDI6.122e-6268.1814-3-3-like protein OS=Dictyostelium discoideum GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BE04ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872422 ID=FC872422; Name=FC872422; organism=Citrus clementina; type=EST; length=819bp
GGGGGCCAGAGGGAATGAACTTAGTGTGAAAAGAATTAAAGAGTATAGGC
AAAAGGTAGAAGCTGAGCTGTCCAAGATCAGCACTGATATTATGCAAGTC
ATTGATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGTGTT
TTACTATAAAATGAAAGGTGATTATTATCGGTACTTGGCATAGTTTAAGA
CTGGTGATGAAAGGAAAAATGTTGCTGATCTGTCAATGAAAGCCTATCAG
GCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCATCCG
ACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGAACT
CTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCCATC
TCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTTGAT
AATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATACCAG
AGGATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAGATGGT
GAAGGCGAAGATTGAAGAAGCAGAGTGAACCAGCCAGGAGCTTGGGAGCT
CTAGCATATGATAGCAAGGAAGCTGCAATACCTTTATGACTCCCGGTGTT
TTTCTTAGTTTACAAGAGACACTCAAGTACTGTTATTGTGCTGTTCCTAT
AATGTGGGTGTTATCTTCACTGTCAAGAGTTTCATGATTGGACTGCTTGT
ATCATTTGCATCCCAGAATCTTTTATATCTGCTGCTGCTGATCAAAAAAA
AAAAAAAAAAAAAAAAAAA
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