FC872422

Overview
NameFC872422
Unique NameFC872422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC872422_ssr779 microsatellite FC872422_ssr779:779..790. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433Z_PONAB (14-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.321e-56
Identity = 109/171 (63.74%), Postives = 132/171 (77.19%), Query Frame = 2 
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            G E   +  +EYR+K+E EL  I  D++ ++++ LIP+ +  ES VFY KMKGDYYRYLA    GD++K + D S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:   71 GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433Z_HUMAN (14-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.321e-56
Identity = 109/171 (63.74%), Postives = 132/171 (77.19%), Query Frame = 2 
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            G E   +  +EYR+K+E EL  I  D++ ++++ LIP+ +  ES VFY KMKGDYYRYLA    GD++K + D S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:   71 GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433Z_BOVIN (14-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.321e-56
Identity = 109/171 (63.74%), Postives = 132/171 (77.19%), Query Frame = 2 
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            G E   +  +EYR+K+E EL  I  D++ ++++ LIP+ +  ES VFY KMKGDYYRYLA    GD++K + D S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:   71 GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.321e-56
Identity = 108/169 (63.91%), Postives = 133/169 (78.70%), Query Frame = 2 
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 517
            G+E   +  K+YR+K+E EL  I  +++ ++D+ LIP  T  ES VFY KMKGDYYRYLA   TGDER+ V + S +AY  A   A+ ++ PTHPIRLGLALNFSVFYYEI+N+P+RACHLAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD    GGD+
Sbjct:   40 GSERKQQMAKDYREKIEKELKDICHEVLTLLDKFLIPKATTAESKVFYLKMKGDYYRYLAEVATGDERQKVIEESQRAYNDAFDIAKNQMQPTHPIRLGLALNFSVFYYEILNAPDRACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD---TGGDD 205
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433Z_RAT (14-3-3 protein zeta/delta OS=Rattus norvegicus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.253e-56
Identity = 109/171 (63.74%), Postives = 132/171 (77.19%), Query Frame = 2 
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            G E   +  +EYR+K+E EL  I  D++ ++++ LIP+ +  ES VFY KMKGDYYRYLA    GD++K + D S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:   71 GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433Z_MOUSE (14-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.253e-56
Identity = 109/171 (63.74%), Postives = 132/171 (77.19%), Query Frame = 2 
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            G E   +  +EYR+K+E EL  I  D++ ++++ LIP+ +  ES VFY KMKGDYYRYLA    GD++K + D S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:   71 GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433Z_CHICK (14-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.844e-56
Identity = 108/171 (63.16%), Postives = 132/171 (77.19%), Query Frame = 2 
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            G E   +  +EYR+K+E EL  I  D++ ++++ LIP+ +  ES VFY KMKGDYYRYLA    GD++K + + S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:   71 GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVEQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 3.844e-56
Identity = 107/170 (62.94%), Postives = 132/170 (77.65%), Query Frame = 2 
Query:   14 NELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            NE   +  KEYR+K+EAEL  I  D++Q++D++LIP+ T  ES VFY KMKGDY+RYL+   +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:   74 NEKKQQMGKEYREKIEAELQDICNDVLQLLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433Z_SHEEP (14-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.020e-56
Identity = 109/171 (63.74%), Postives = 132/171 (77.19%), Query Frame = 2 
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            G E   +  +EYR+K+E EL  I  D++ ++++ LIP+ +  ES VFY KMKGDYYRYLA    GD++K + D S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:   71 GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNRSQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238
[Close]
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 143B1_DANRE (14-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywhab1 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 6.556e-56
Identity = 104/171 (60.82%), Postives = 134/171 (78.36%), Query Frame = 2 
Query:   11 GNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 523
            GNE   +  +EYR+K+EAEL +I  D++ +++++LIP+ +  ES VFY KMKGDYYRYL+   +GD ++   + S KAYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+N+PE+AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:   71 GNEKKQQMAREYREKIEAELQEICNDVLGLLEKYLIPNASQAESKVFYLKMKGDYYRYLSEVASGDSKRTTVENSQKAYQDAFEISKKEMQPTHPIRLGLALNFSVFYYEILNTPEQACSLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 241
The following BLAST results are available for this feature:
BLAST of FC872422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433Z_PONAB1.321e-5663.7414-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ... [more]
1433Z_HUMAN1.321e-5663.7414-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ... [more]
1433Z_BOVIN1.321e-5663.7414-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ P... [more]
14332_SCHMA1.321e-5663.9114-3-3 protein homolog 2 (Fragment) OS=Schistosoma... [more]
1433Z_RAT2.253e-5663.7414-3-3 protein zeta/delta OS=Rattus norvegicus GN=... [more]
1433Z_MOUSE2.253e-5663.7414-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz... [more]
1433Z_CHICK3.844e-5663.1614-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2... [more]
1433B_BOVIN3.844e-5662.9414-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P... [more]
1433Z_SHEEP5.020e-5663.7414-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ P... [more]
143B1_DANRE6.556e-5660.8214-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BE04ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872422 ID=FC872422; Name=FC872422; organism=Citrus clementina; type=EST; length=819bp
GGGGGCCAGAGGGAATGAACTTAGTGTGAAAAGAATTAAAGAGTATAGGC
AAAAGGTAGAAGCTGAGCTGTCCAAGATCAGCACTGATATTATGCAAGTC
ATTGATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGTGTT
TTACTATAAAATGAAAGGTGATTATTATCGGTACTTGGCATAGTTTAAGA
CTGGTGATGAAAGGAAAAATGTTGCTGATCTGTCAATGAAAGCCTATCAG
GCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCATCCG
ACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGAACT
CTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCCATC
TCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTTGAT
AATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATACCAG
AGGATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAGATGGT
GAAGGCGAAGATTGAAGAAGCAGAGTGAACCAGCCAGGAGCTTGGGAGCT
CTAGCATATGATAGCAAGGAAGCTGCAATACCTTTATGACTCCCGGTGTT
TTTCTTAGTTTACAAGAGACACTCAAGTACTGTTATTGTGCTGTTCCTAT
AATGTGGGTGTTATCTTCACTGTCAAGAGTTTCATGATTGGACTGCTTGT
ATCATTTGCATCCCAGAATCTTTTATATCTGCTGCTGCTGATCAAAAAAA
AAAAAAAAAAAAAAAAAAA
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