FC872427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872427 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22 Identity = 65/222 (29.28%), Postives = 104/222 (46.85%), Query Frame = 3 Query: 153 DLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVD-------GTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS-YGADKFVDFKDHSDPEKFIKAIKDMCD 794 +++ +V +R+ + GVC+ D+ W + PLV GHE AG + +G + KVG +VG+ +SC DCENC +E CS+ + SVD G + + + + R+ IP PL +AAP+LCAG+TVY ++ ++ A GL+V T + KR+ + GAD FV D + E ++ + D Sbjct: 31 EVQSEDVSLRITHCGVCYADV-IWTRNMFNDSIYPLVPGHEIAGVVTEVG-ADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMESLKSSLHFIID 250
BLAST of FC872427 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22 Identity = 71/222 (31.98%), Postives = 103/222 (46.40%), Query Frame = 3 Query: 162 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQ-------AQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS-YGADKFVDFKDHSDPEKFIKAIKDMCDGV 800 P +V+VRV Y G+CH+DL + P+V GHE G + IG + KVG++VG+ + SC C NC +E CS+ G G F V V IP+ LPLEQAAP+LCAGVTVY + + PG+ + A A GL V I + D K++ GAD ++ KD ++ +++ + D + Sbjct: 34 PEDVIVRVIYCGICHSDLVQMHNEM-GMSNYPMVPGHEVVGVVTEIGS-EVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGK-KCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTI 252
BLAST of FC872427 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22 Identity = 53/145 (36.55%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 153 DLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYS--------VDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 563 D P +V + + ++G+CH+D+H K +W +P P+V GHE AG + A+G +T + G VG+ DSC +C +C GIE C Y+ G + + V +V IPD LPL+ AAP+LCAG+T+Y L Sbjct: 25 DPGPHDVAIDIKFAGICHSDIHTVKAEW-GQPNYPVVPGHEIAGVVTAVGS-EVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPL 167
BLAST of FC872427 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22 Identity = 53/145 (36.55%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 153 DLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYS--------VDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 563 D P +V + + ++G+CH+D+H K +W +P P+V GHE AG + A+G +T + G VG+ DSC +C +C GIE C Y+ G + + V +V IPD LPL+ AAP+LCAG+T+Y L Sbjct: 25 DPGPHDVAIDIKFAGICHSDIHTVKAEW-GQPNYPVVPGHEIAGVVTAVGS-EVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPL 167
BLAST of FC872427 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.063e-21 Identity = 71/218 (32.57%), Postives = 105/218 (48.17%), Query Frame = 3 Query: 162 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQ-------AQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS-YGADKFVDFKDHSDPEKFIKAIKDM 788 P +V+V+V Y G+CH+DL + + P+V GHE G + IG + KVG++VG+ + SC C NC + +E CS+ G G F V V IP+ LPLEQAAP+LCAGVTV+ + + + PG+ + A A GL V I + D K++ GAD ++ K D EK ++A + + Sbjct: 34 PEDVIVKVIYCGICHSDLVQMRNEM-GMSHYPMVPGHEVVGIVTEIGS-EVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGK-KCGILGLGGVGHLGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSK---DTEKMMEAAESL 245
BLAST of FC872427 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.063e-21 Identity = 71/218 (32.57%), Postives = 105/218 (48.17%), Query Frame = 3 Query: 162 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQ-------AQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS-YGADKFVDFKDHSDPEKFIKAIKDM 788 P +V+V+V Y G+CH+DL + + P+V GHE G + IG + KVG++VG+ + SC C NC + +E CS+ G G F V V IP+ LPLEQAAP+LCAGVTV+ + + + PG+ + A A GL V I + D K++ GAD ++ K D EK ++A + + Sbjct: 34 PEDVIVKVIYCGICHSDLVQMRNEM-GMSHYPMVPGHEVVGIVTEIGS-EVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGK-KCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSK---DTEKMMEAAESL 245
BLAST of FC872427 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.063e-21 Identity = 69/227 (30.40%), Postives = 102/227 (44.93%), Query Frame = 3 Query: 162 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC-------SQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKR-KLCASYGADKFVDFKDHSDPEKFIKAIKDMCDGVGPHAAV 818 P +V +R+ G+CHTDLH K D P+V GHE G +V +G ++ VG VG+ L C C C +E C + +G G F + V + + V IP+G+ +EQAAP+LCAGVTVY L + + + A AMG V I + + KR + GAD +V D + + ++ + D V H A+ Sbjct: 34 PEDVNIRIICCGICHTDLHQTKNDL-GMSNYPMVPGHEVVGEVVEVGSD-VSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHAL 258
BLAST of FC872427 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.389e-21 Identity = 67/203 (33.00%), Postives = 93/203 (45.81%), Query Frame = 3 Query: 162 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCS-------GYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRK-LCASYGADKFVDFKD 746 P +V +++ Y GVCH+DLH K D P+V GHE G ++ +G +T KVG+ VG+ L C C C IE C++ S G G F + V + V IP+GL EQ AP+LCAGVTVY L + + + A A+G V I + D K+K GAD ++ D Sbjct: 35 PDDVYIKIHYCGVCHSDLHQIKNDL-GMSNYPMVPGHEVVGEVLEVGSN-VTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSD 235
BLAST of FC872427 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.814e-21 Identity = 71/213 (33.33%), Postives = 97/213 (45.54%), Query Frame = 3 Query: 162 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEA-------TCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASY-GADKFVDFKDHSDPEKFIKA 776 P +V V+V Y G+CH+DLH K D PLV GHE G +V +G ++ KVG VG+ L SC +C C+ IE C+ G G F V V IP+G+ EQAAP+LCAG+TVY + + + A AMG V I + + KR+ + GAD D+ SD +K +A Sbjct: 34 PEDVQVKVLYCGLCHSDLHQVKNDL-GMSNYPLVPGHEVVGKVVEVG-ADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGAD---DYLVSSDTDKMQEA 241
BLAST of FC872427 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.093e-21 Identity = 69/222 (31.08%), Postives = 103/222 (46.40%), Query Frame = 3 Query: 162 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCS-------GYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARP-GQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASY-GADKFVDFKDHSDPEKFIKAIKDMCDGV 800 P +V +++ Y G+CHTD+H K D A P+V GHE G +V +G +T KVG VG + C C C+ +E C++ S G G F + V + V IPDG+ EQAAP+LCAGVTVY L + + + A AMG V I + D K++ + GAD ++ D + ++ ++ + D V Sbjct: 34 PEDVFIKIIYCGICHTDIHQIKNDLGAS-NYPMVPGHEVVGEVVEVGSD-VTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQEAADSLDYIIDTV 253 The following BLAST results are available for this feature:
BLAST of FC872427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 223
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872427 ID=FC872427; Name=FC872427; organism=Citrus clementina; type=EST; length=823bpback to top |