FC872447

Overview
NameFC872447
Unique NameFC872447
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length974
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872447 vs. ExPASy Swiss-Prot
Match: GLO2_VIBPA (Hydroxyacylglutathione hydrolase OS=Vibrio parahaemolyticus GN=gloB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.423e-36
Identity = 90/260 (34.62%), Postives = 133/260 (51.15%), Query Frame = 3
Query:   39 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVG----FNDPIEALREIRKRKDNW 806
            ++I  IP   DNY +LI + + K  AVVDP + + +++  +                DH GG   +    P + V G   + +   T  +E GDK  +   +  L L  P HT GHI Y        D  +F GD LF AGCG+ FEG+ EQM++SL   + +LP+ TQV+C HEYT  N+ FAL VEP N +L+Q        R   +PT+P+T+ +E   NPF+R   P++ K V      +DP      +R+ K+ +
Sbjct:    2 LEIKSIPAFNDNYIWLI-QNSDKRCAVVDPGDAQPVLDYLQANELTLEAILVTHHHNDHIGGVPDLVRAFPHVTVVGPKAEPIPTLTTPMEEGDKLELFGEI-FLVLGLPGHTLGHIGYV------GDSKLFCGDVLFSAGCGRIFEGTPEQMFESLS-KIAALPEETQVFCAHEYTASNVAFALAVEPDNEQLRQYRDDVNRLRALNIPTLPTTLRKEKWINPFLRTTNPDVVKSVANRIKNSDPCSVFTALREWKNEF 252          
BLAST of FC872447 vs. ExPASy Swiss-Prot
Match: GLO2_PSEA8 (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa (strain LESB58) GN=gloB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.423e-36
Identity = 92/237 (38.82%), Postives = 130/237 (54.85%), Query Frame = 3
Query:   39 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEA--AKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQK 743
            ++I  +P   DNY +L+ + T++  AVVDP +  K +EA  A                 DH GG   +KE+  G +V G + + +      +E+G++  +   V  +  H P HT GHI+YY      E P +F GDTLF AGCG+ FEG+  QM+ SL   L +LP  T+VYC HEYT+ NL FAL VEP N  L+++   A   R+    T+PS I  EL TNPF+RV    ++K
Sbjct:    2 IQIDALPAFNDNYIWLLQDATSRRCAVVDPGDA-KPVEAWLAAHPDWRLSDILVTHHHHDHVGGVAALKELT-GARVLGPANEKIPARDLALEDGERVEVLGLVFEI-FHVPGHTLGHIAYY---HPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSLA-RLAALPANTRVYCTHEYTLSNLRFALAVEPDNAALRERFEEATRLRERDRITLPSEISLELSTNPFLRVSEKSVKK 231          
BLAST of FC872447 vs. ExPASy Swiss-Prot
Match: GLO2_PSEAE (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa GN=gloB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.776e-36
Identity = 92/237 (38.82%), Postives = 130/237 (54.85%), Query Frame = 3
Query:   39 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEA--AKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQK 743
            ++I  +P   DNY +L+ + T++  AVVDP +  K +EA  A                 DH GG   +KE+  G +V G + + +      +E+G++  +   V  +  H P HT GHI+YY      E P +F GDTLF AGCG+ FEG+  QM+ SL   L +LP  T+VYC HEYT+ NL FAL VEP N  L+++   A   R+    T+PS I  EL TNPF+RV    ++K
Sbjct:    2 IQIDALPAFNDNYIWLLQDATSRRCAVVDPGDA-KPVEAWLAAHPDWRLSDILVTHHHHDHVGGVAALKELT-GARVLGPANEKIPARDLALEDGERVEVLGLVFEI-FHVPGHTLGHIAYY---HPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSLA-RLAALPANTRVYCTHEYTLSNLRFALAVEPDNAALRERFEEATRLRERDRITLPSEISLELSTNPFLRVSENSVKK 231          
BLAST of FC872447 vs. ExPASy Swiss-Prot
Match: GLO2_MESSB (Hydroxyacylglutathione hydrolase OS=Mesorhizobium sp. (strain BNC1) GN=gloB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.776e-36
Identity = 95/258 (36.82%), Postives = 134/258 (51.94%), Query Frame = 3
Query:   39 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGFND--PIEALREIRKRKD 800
            ++I    C  DN+  L  +  T   A+VD  E + I+EA K+               DH   N  +KE   G+ + G + +   + G   QV  GD   +G +     + TP HT GHI++Y   K G     FT DTLF  GCG+ FE     MY+SL   L  LP  T +YCGHEYT  N  FAL+V+P+N  L+++    +  R+ G PT+P+T+ EE+ TNPF+R   P L+  +G  +   +E   EIRKRKD
Sbjct:    3 LEIEQFMCRSDNFGILARDSETGITALVDAPEEQAILEAIKRTGWTPSLLLITHHHADHVEANLALKERF-GLTIIGPAKEASKIPGIDRQVNEGDVVRVG-NQEARVIETPGHTAGHITFYFA-KAG---IAFTADTLFALGCGRLFECKPPVMYESL-KKLVELPLETVIYCGHEYTESNARFALSVDPTNSALKERAKKIEALRREGRPTLPTTLGEEMATNPFLRCHDPVLRNNLGMKNAADVEVFAEIRKRKD 253          
BLAST of FC872447 vs. ExPASy Swiss-Prot
Match: GLO2_HALHL (Hydroxyacylglutathione hydrolase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=gloB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.544e-36
Identity = 87/230 (37.83%), Postives = 122/230 (53.04%), Query Frame = 3
Query:   54 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQK 743
            +  L DNY ++  + +   A  VDP +   +                     DH GG  ++ E    + V+G + + +    H +  G+ FS+        L  P HT GHI+Y   G       +F+GD LF  GCG+ FEG+A QM+ SL   L +LP  T+V CGHEYTVKNL FA   +P N +L Q+L  A++ R AG PT+PST+ EEL TNPF+R D PEL++
Sbjct:    7 LAALADNYIWMARDASGTTAFAVDPGDAAVVEAWLHDHQLRLAAVLVTHHHGDHTGGVAELAER-HRVPVFGPATETIPTVDHPITGGEHFSLEGFGEFRVLDCPGHTAGHIAYLWEGH------LFSGDALFAGGCGRVFEGTAGQMHASL-QHLAALPADTRVCCGHEYTVKNLEFAHCADPKNDRLAQRLQAARDARAAGQPTVPSTLAEELATNPFLRTDCPELRR 228          
BLAST of FC872447 vs. ExPASy Swiss-Prot
Match: GLO2_SHEHH (Hydroxyacylglutathione hydrolase OS=Shewanella halifaxensis (strain HAW-EB4) GN=gloB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.852e-36
Identity = 91/264 (34.47%), Postives = 135/264 (51.14%), Query Frame = 3
Query:   39 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMV-PGIKVYGGSLDNVKGCTHQVE-NGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGFN------DPIEALREIRKRKDNW 806
            ++I  +P   DNY ++   + +    VVDP + + + +   Q               DH GG E++ ++      VYG  ++N+ G    +  NG+       +N   +  P HT GHI Y +      + A+F GDTLF  GCG+ FEG+AEQMYQSL   L  LP  T+V+C HEYT+ NL FA  VE +N  L +    A   R    PT+PS+I  E   NPF+R+D  E+QK +         DP+++   +R+ KDN+
Sbjct:    2 LQITPLPAFNDNYIWVFQSQQSSGVYVVDPGDGQVVTDYLTQTNLPLLGILITHHHHDHTGGIEQLLKLFGEDTPVYGPQVENIAGVNRPISTNGNITLENIGLNTTVIQVPGHTSGHICYLI------EDALFCGDTLFSGGCGRLFEGTAEQMYQSL-TQLSLLPDNTRVFCAHEYTLANLHFAKAVEANNPALIEYTVKAHALRAENKPTLPSSIALEKAINPFLRLDSLEIQKSLAVQFQQPIADPVQSFALLRQWKDNF 258          
BLAST of FC872447 vs. ExPASy Swiss-Prot
Match: GLO2_PHOLL (Hydroxyacylglutathione hydrolase OS=Photorhabdus luminescens subsp. laumondii GN=gloB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.852e-36
Identity = 90/262 (34.35%), Postives = 140/262 (53.44%), Query Frame = 3
Query:   39 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNV--KLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGF---NDPIEAL-REIRKRKDNW 806
            M++  IP L DNY +L+ +E  +   +VDP E + +++  +                DH GG   I +  P + VYG +    KG T  V  GD  + G H +   +  P HT GHI++Y      + P +F GDTLF  GCG+ FEG+AEQMY S+   +  LP  T + C HEYT+ N+ FA  V P+    + QQK+      R+   PTIP+T++ E + N F++ D  +LQ+ +G    + P+ A+  ++R++KD +
Sbjct:    1 MELISIPALSDNYIWLLCDEN-RHVVIVDPAESQPVLDTLESRGWIPDAILLTHHHHDHVGGVPGIIDRFPELLVYGPAETQSKGATIIVCGGDSINFG-HFSFQIIDVPGHTLGHIAFY------QAPYLFCGDTLFSGGCGRLFEGTAEQMYTSI-GKIAELPDDTLICCAHEYTISNMKFAHAVLPNQTISEYQQKVI---RMRENNQPTIPTTLQTEKKINIFLKCDDIDLQRNIGITPNSQPLSAVFHQLRRQKDQF 250          
BLAST of FC872447 vs. ExPASy Swiss-Prot
Match: GLO2_BRUSI (Hydroxyacylglutathione hydrolase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=gloB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.287e-35
Identity = 100/267 (37.45%), Postives = 139/267 (52.06%), Query Frame = 3
Query:   12 LRALEQRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGFND-PIEAL-REIRKRKD 800
            +  +EQR++++ F   C  DNY  LI +  +   A +D  +   I  A ++               DH  GNE +KE   G+ + G   +  K  G    V+ GD+F+ G    V  + TP HT G ISYY+   +     VFTGDTLF  GCG+ FEG+   M+ SL   L +LP  T +YCGHEYT  N  FALT++P N  L+++       R     T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:    1 MHRMEQRLEIEQFI--CRSDNYGVLIHDPESALTATIDAPDAYAIEAALERRGWTLDFIFTTHHHLDHVEGNEPLKEKF-GVSIIGPEAEKAKIPGIDRTVKGGDEFTFGLF-KVKVISTPGHTAGGISYYLPDAK----VVFTGDTLFALGCGRLFEGTPATMFHSL-EKLVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 258          
BLAST of FC872447 vs. ExPASy Swiss-Prot
Match: GLO2_BRUMB (Hydroxyacylglutathione hydrolase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=gloB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.287e-35
Identity = 100/267 (37.45%), Postives = 139/267 (52.06%), Query Frame = 3
Query:   12 LRALEQRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGFND-PIEAL-REIRKRKD 800
            +  +EQR++++ F   C  DNY  LI +  +   A +D  +   I  A ++               DH  GNE +KE   G+ + G   +  K  G    V+ GD+F+ G    V  + TP HT G ISYY+   +     VFTGDTLF  GCG+ FEG+   M+ SL   L +LP  T +YCGHEYT  N  FALT++P N  L+++       R     T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:    1 MHRMEQRLEIEQFI--CRSDNYGVLIHDPESALTATIDAPDAYAIEAALERRGWTLDFIFTTHHHLDHVEGNEPLKEKF-GVSIIGPEAEKAKIPGIDRTVKGGDEFTFGLF-KVKVISTPGHTAGGISYYLPDAK----VVFTGDTLFALGCGRLFEGTPATMFHSL-EKLVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 258          
BLAST of FC872447 vs. ExPASy Swiss-Prot
Match: GLO2_BRUC2 (Hydroxyacylglutathione hydrolase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=gloB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.287e-35
Identity = 100/267 (37.45%), Postives = 139/267 (52.06%), Query Frame = 3
Query:   12 LRALEQRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGFND-PIEAL-REIRKRKD 800
            +  +EQR++++ F   C  DNY  LI +  +   A +D  +   I  A ++               DH  GNE +KE   G+ + G   +  K  G    V+ GD+F+ G    V  + TP HT G ISYY+   +     VFTGDTLF  GCG+ FEG+   M+ SL   L +LP  T +YCGHEYT  N  FALT++P N  L+++       R     T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:    1 MHRMEQRLEIEQFI--CRSDNYGVLIHDPESALTATIDAPDAYAIEAALERRGWTLDFIFTTHHHLDHVEGNEPLKEKF-GVSIIGPEAEKAKIPGIDRTVKGGDEFTFGLF-KVKVISTPGHTAGGISYYLPDAK----VVFTGDTLFALGCGRLFEGTPATMFHSL-EKLVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 258          
The following BLAST results are available for this feature:
BLAST of FC872447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
GLO2_VIBPA4.423e-3634.62Hydroxyacylglutathione hydrolase OS=Vibrio parahae... [more]
GLO2_PSEA84.423e-3638.82Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_PSEAE5.776e-3638.82Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_MESSB5.776e-3636.82Hydroxyacylglutathione hydrolase OS=Mesorhizobium ... [more]
GLO2_HALHL7.544e-3637.83Hydroxyacylglutathione hydrolase OS=Halorhodospira... [more]
GLO2_SHEHH9.852e-3634.47Hydroxyacylglutathione hydrolase OS=Shewanella hal... [more]
GLO2_PHOLL9.852e-3634.35Hydroxyacylglutathione hydrolase OS=Photorhabdus l... [more]
GLO2_BRUSI1.287e-3537.45Hydroxyacylglutathione hydrolase OS=Brucella suis ... [more]
GLO2_BRUMB1.287e-3537.45Hydroxyacylglutathione hydrolase OS=Brucella melit... [more]
GLO2_BRUC21.287e-3537.45Hydroxyacylglutathione hydrolase OS=Brucella canis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BF12ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BF12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872447 ID=FC872447; Name=FC872447; organism=Citrus clementina; type=EST; length=974bp
GGGGGCCGGAACTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTT
CATATTCCTTGTTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGAC
CACTAAAGAAGCTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTG
AGGCTGCCAAACAACACGGTGTCAATCTCACCACCGTTCTCACTACTCAT
CATCACTGGGACCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCC
TGGGATTAAGGTGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTC
ATCAAGTGGAAAATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTA
CTGTCTCTTCACACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGT
GACTGGCAAAGAGGGAGAAGACCCAGCTGTTTTCACTGGTGACACACTGT
TTGTCGCTGGTTGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTAT
CAATCCCTGTGCGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTA
CTGTGGCCATGAGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTTG
AACCAAGCAATGTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAG
CGGCAAGCTGGCCTGCCAACCATTCCCTCAACCATTGAGGAAGAGTTGGA
GACGAACCCCTTCATGCGTGTTGATCTACCAGAGCTTCAGAAGTTGGTTG
GTTTCAATGATCCCATTGAAGCTCTCCGGGAGATAAGGAAGCGAAAGGAC
AATTGGAGAGGCTGATTAAGGACCTGCATCAAGCCTTTACATTTTTTCCA
CCCCGGTTTGCTTTTTGTTATTTATCTGGGGTGGGAATGGTGCCATATAT
GGGACTTGGTTTTGTTTTGTTAATGTCTGAAACTTACAGGGCTACGGGGT
TCCCAGTGTTTGCTTCGACTAAAA
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