FC872457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872457 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.800e-17 Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 3 Query: 462 FGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVTDGMQDS 923 F + VK+ GI SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA G Q++G+ D KK LK +G+ Y+G+ + +G I Y G+ +Y+ L + + +DS Sbjct: 238 FRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFISG----SMAGATAQTFIYPMEVMKTRLA-------VGKTGQYSGIYDCAKKILKHEGLGAFYKGYVPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDS 380 HSP 2 Score: 33.4982 bits (75), Expect = 7.800e-17 Identity = 12/25 (48.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 323 LMGGVSAAVSKTAAAPIERVKLLIQ 397 L GG++ AVS+T+ AP++R+K+++Q Sbjct: 199 LAGGIAGAVSRTSTAPLDRLKIMMQ 223
BLAST of FC872457 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.318e-16 Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 3 Query: 462 FGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVTDGMQDS 923 F + VK+ GI SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA G Q++G+ D KK LK +G+ Y+G+ + +G I Y G+ +Y+ L + + +DS Sbjct: 238 FQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFVSG----SMAGATAQTFIYPMEVLKTRLA-------VGKTGQYSGMFDCAKKILKYEGMGAFYKGYVPNLLGIIPYAGIDLAVYELLKSHWLDNFAKDS 380 HSP 2 Score: 33.4982 bits (75), Expect = 1.318e-16 Identity = 13/25 (52.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 323 LMGGVSAAVSKTAAAPIERVKLLIQ 397 L GGV+ AVS+T+ AP++R+K+++Q Sbjct: 199 LAGGVAGAVSRTSTAPLDRLKVMMQ 223
BLAST of FC872457 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.762e-16 Identity = 47/154 (30.52%), Postives = 76/154 (49.35%), Query Frame = 3 Query: 462 FGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVTDGMQDS 923 F + VK+ GI SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA AK G Q++G+ KK LK +G Y+G+ + +G I Y G+ +Y+ L + + +DS Sbjct: 236 FRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKLGTFERFISG----SMAGATAQTFIYPMEVLKTRLA----VAKTG---QYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDS 378 HSP 2 Score: 33.4982 bits (75), Expect = 3.762e-16 Identity = 13/25 (52.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 323 LMGGVSAAVSKTAAAPIERVKLLIQ 397 L GGV+ AVS+T+ AP++R+K+++Q Sbjct: 199 LAGGVAGAVSRTSTAPLDRLKVMMQ 223
BLAST of FC872457 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.890e-16 Identity = 44/154 (28.57%), Postives = 75/154 (48.70%), Query Frame = 3 Query: 462 FGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVTDGMQDS 923 F + +K+ G+ SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA G Q++G+ D KK LK +G Y+G+ + +G I Y G+ +Y+ L + + +DS Sbjct: 236 FRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQYKKLLTEEGQKIGTFERFISG----SMAGATAQTFIYPMEVMKTRLA-------VGKTGQYSGIYDCAKKILKYEGFGAFYKGYVPNLLGIIPYAGIDLAVYELLKSHWLDNFAKDS 378 HSP 2 Score: 33.113 bits (74), Expect = 4.890e-16 Identity = 12/25 (48.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 323 LMGGVSAAVSKTAAAPIERVKLLIQ 397 L GG++ AVS+T+ AP++R+K+++Q Sbjct: 199 LAGGIAGAVSRTSTAPLDRLKVMMQ 223
BLAST of FC872457 vs. ExPASy Swiss-Prot
Match: SCM1B_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-B PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.355e-16 Identity = 44/150 (29.33%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 474 VKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVTDGMQDS 923 VK+ GI SLWRGN NVI+ P A+ F + +K+LF + + G + F +Y ++ +TRLA G Q++G+ D KK ++ +GI Y+G+ + +G I Y G+ +Y++L + + +DS Sbjct: 241 VKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAERFVAGSLAGATAQTS----IYPMEVLKTRLA-------VGRTGQYSGMFDCAKKIMQKEGIRAFYKGYIPNILGIIPYAGIDLAIYETLKNYWLQNHAKDS 379 HSP 2 Score: 32.7278 bits (73), Expect = 6.355e-16 Identity = 12/37 (32.43%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 287 QKKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 397 ++K + + GG++ AVS+T AP++R+K+++Q Sbjct: 187 EEKKTGQWWKQLMAGGMAGAVSRTGTAPLDRLKVMMQ 223
BLAST of FC872457 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.073e-15 Identity = 45/151 (29.80%), Postives = 77/151 (50.99%), Query Frame = 3 Query: 474 VKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWF-AGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVTDGMQDS 923 VK+ G+ SLWRGN NVI+ P A+ F + +K+LF + + G + F AG+ +Y ++ +TRLA G Q++G+ D KK ++ +GI Y+G+ + +G I Y G+ +Y++L + + +DS Sbjct: 241 VKEGGVRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAERFIAGSLAGATAQTS-----IYPMEVLKTRLA-------VGKTGQYSGMFDCAKKIMQKEGILAFYKGYIPNILGIIPYAGIDLAIYETLKNYWLQNYAKDS 379 HSP 2 Score: 33.113 bits (74), Expect = 1.073e-15 Identity = 13/37 (35.14%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 287 QKKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 397 ++K + L GG++ AVS+T AP++R+K+++Q Sbjct: 187 EEKKTGQWWKHLLAGGMAGAVSRTGTAPLDRLKVMMQ 223
BLAST of FC872457 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-15 Identity = 45/151 (29.80%), Postives = 76/151 (50.33%), Query Frame = 3 Query: 474 VKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWF-AGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVTDGMQDS 923 VK+ GI SLWRGN NVI+ P A+ F + +K+LF + + G + F AG+ +Y ++ +TRLA G Q++G+ D KK ++ +G+ Y+G+ + +G I Y G+ +Y++L + + DS Sbjct: 241 VKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAERFIAGSLAGATAQTS-----IYPMEVLKTRLA-------VGKTGQYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYATDS 379 HSP 2 Score: 33.4982 bits (75), Expect = 1.395e-15 Identity = 13/37 (35.14%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 287 QKKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 397 ++K + L GG++ AVS+T AP++R+K+++Q Sbjct: 187 EEKKTGQWWKQLLAGGMAGAVSRTGTAPLDRLKVMMQ 223
BLAST of FC872457 vs. ExPASy Swiss-Prot
Match: S2542_XENTR (Solute carrier family 25 member 42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.018e-15 Identity = 41/140 (29.29%), Postives = 64/140 (45.71%), Query Frame = 3 Query: 468 RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSL 887 RT +EG LSLWRGN+A ++R P A+ F + +K+L G Y LD R R+A K ++ +I V+ + + +G+ LYRGF+ + +G I Y G+ F Y++L Sbjct: 82 RTYLNEGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKLLGSYYGFQGSALTPIPRLLAGALAGTTATIITYPLDLVRARMAVTPK-------EMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETL 214 HSP 2 Score: 33.8834 bits (76), Expect = 4.018e-15 Identity = 15/37 (40.54%), Postives = 24/37 (64.86%), Query Frame = 2 Query: 293 KSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQKS 403 K+ S L + G ++ AV+KTA AP++R K++ Q S Sbjct: 31 KNHKSILNSLMSGALAGAVAKTAVAPLDRTKIIFQVS 67
BLAST of FC872457 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.473e-14 Identity = 43/155 (27.74%), Postives = 78/155 (50.32%), Query Frame = 3 Query: 462 FGRTVKDEGILSLWRGNTANVIRYFPTQALNF-AFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVTDGMQDS 923 F + +K+ G+ SLWRGN NVI+ P A+ F A++ Y K L + ++ AG+ +Y ++ +TRL +K G Q++G+ D KK L+ +G+ Y+G+ + +G I Y G+ +Y++L ++ +D+ Sbjct: 239 FKQMIKEGGVASLWRGNGVNVIKIAPETAIKFMAYEQYKKLLSKDGGKVQSHERFMAGSLAGATAQTA-----IYPMEVMKTRL-----TLRKTG--QYSGMFDCAKKILRKEGVKAFYKGYVPNILGIIPYAGIDLAVYETLKNTWLSHYAKDT 381 HSP 2 Score: 31.9574 bits (71), Expect = 1.473e-14 Identity = 13/37 (35.14%), Postives = 24/37 (64.86%), Query Frame = 2 Query: 287 QKKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 397 ++K+ + GGV+ AVS+T AP++R+K+ +Q Sbjct: 188 EEKTTGMWWKQLAAGGVAGAVSRTGTAPLDRMKVFMQ 224
BLAST of FC872457 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3) HSP 1 Score: 65.0846 bits (157), Expect = 1.933e-14 Identity = 49/162 (30.25%), Postives = 72/162 (44.44%), Query Frame = 3 Query: 432 SHPYK--GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVT 905 +H YK G+ + EG L L++GN A +IR FP A+ F +++K L K G+ + AG+ Y LD R RLA K GE + G+I +K K G G YRG + +G Y G+ F + +L VG++ Sbjct: 68 NHHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLS 219 HSP 2 Score: 34.6538 bits (78), Expect = 1.933e-14 Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 2 Query: 308 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 397 +L FL GG++ +KT AP++RVK+L+Q Sbjct: 36 WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQ 65 The following BLAST results are available for this feature:
BLAST of FC872457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872457 ID=FC872457; Name=FC872457; organism=Citrus clementina; type=EST; length=951bpback to top |