FC872458

Overview
NameFC872458
Unique NameFC872458
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length427
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872458 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.093e-12
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 2
Query:    5 WIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHTGPEYKPKECLAMIDRWFASYPL 214
            WI+SLN +    W+PW++ +Q+AGY   Y  K    +TFAT+KG GHT  EY+P E   M  RW +  PL
Sbjct:  369 WIRSLNYSPIHNWRPWMINNQIAGYTRAYSNK----MTFATIKGGGHTA-EYRPNETFIMFQRWISGQPL 433          
BLAST of FC872458 vs. ExPASy Swiss-Prot
Match: SCP2_ARATH (Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.093e-12
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 2
Query:    5 WIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHTGPEYKPKECLAMIDRWFASYPL 214
            WI+SLN +I   W+PW++++Q+AGY   Y  K    +TFAT+KG GHT  E+KP+E   M  RW    PL
Sbjct:  377 WIRSLNYSIIDDWRPWMIKNQIAGYTRTYANK----MTFATIKGGGHT-IEFKPEEASIMFQRWINGQPL 441          
BLAST of FC872458 vs. ExPASy Swiss-Prot
Match: SCP52_ARATH (Putative serine carboxypeptidase-like 52 OS=Arabidopsis thaliana GN=SCPL52 PE=5 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.427e-12
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 2
Query:    5 WIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHTGPEYKPKECLAMIDRWFASYPL 214
            WI+SLN  I   W+PW++ +Q+AGY   Y  K    +T+AT+K +GHT  EYKP E   M  RW +  PL
Sbjct:  120 WIRSLNYPIIDDWRPWIINNQIAGYTMTYANK----MTYATIKASGHTA-EYKPAESFIMFQRWISGQPL 184          
BLAST of FC872458 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.427e-12
Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 2
Query:    5 WIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHTGPEYKPKECLAMIDRWFASYPL 214
            WI+SLN +I   W+PW+V++Q+AGY   Y  K    +TFAT+KG GHT  E KP+E   M  RW    PL
Sbjct:  377 WIRSLNYSIIDDWRPWMVKNQIAGYTRTYANK----MTFATIKGGGHTA-ESKPEEASIMFQRWINGQPL 441          
BLAST of FC872458 vs. ExPASy Swiss-Prot
Match: SCP5_ARATH (Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.179e-12
Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 2
Query:    5 WIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHTGPEYKPKECLAMIDRWFASYPL 214
            W++SLN +I   W+PW+++ Q+ GY   Y  K    +TFATV+G GHT  EYKP E   M  RW    PL
Sbjct:  374 WVRSLNYSIIDNWRPWMIKDQIGGYTKTYANK----MTFATVRGGGHTA-EYKPYETYIMFHRWINGQPL 438          
BLAST of FC872458 vs. ExPASy Swiss-Prot
Match: SCP3_ARATH (Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.179e-12
Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 2
Query:    5 WIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHTGPEYKPKECLAMIDRWFASYPL 214
            WI+SLN ++   W+PW+++ Q+AGY   Y  K    +TFAT++G GHT  E+KP+E   M  RW    PL
Sbjct:  377 WIRSLNYSVIDDWRPWMIKDQIAGYTRTYANK----MTFATIRGGGHT-IEFKPEEASIMFQRWIKGQPL 441          
BLAST of FC872458 vs. ExPASy Swiss-Prot
Match: SCP11_ARATH (Serine carboxypeptidase-like 11 OS=Arabidopsis thaliana GN=SCPL11 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.179e-12
Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 2
Query:    5 WIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHTGPEYKPKECLAMIDRWFASYPL 214
            WIKSLN +I   W+PW++  Q+ GY   Y  K    +TFATVKG+GHT  E KP+E   M  RW    PL
Sbjct:  369 WIKSLNYSIIDEWRPWMIRDQITGYTRTYSNK----MTFATVKGSGHTA-ENKPQESFIMFRRWINGQPL 433          
BLAST of FC872458 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.152e-12
Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 2
Query:    5 WIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHTGPEYKPKECLAMIDRWFASYPL 214
            WI+SLN +I   W+PW+++ Q+AGY   Y  K    +TFATV G GHT  E+ PKE   M  RW    PL
Sbjct:  377 WIRSLNYSIIDDWRPWMIKDQIAGYTTSYVNK----MTFATVTGGGHTA-EFTPKETFMMFQRWINGQPL 441          
BLAST of FC872458 vs. ExPASy Swiss-Prot
Match: SCP15_ARATH (Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 7.083e-12
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 2
Query:    5 WIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHTGPEYKPKECLAMIDRWFASYPL 214
            WI+SLN +I   W+PW++  QVAGY   Y  K    +T ATVKG GHT  EYKP+E   +  RW +  PL
Sbjct:  372 WIRSLNYSITEKWRPWMILDQVAGYTKTYANK----MTLATVKGGGHT-LEYKPEENSVLFKRWISGQPL 436          
BLAST of FC872458 vs. ExPASy Swiss-Prot
Match: SCP14_ARATH (Serine carboxypeptidase-like 14 OS=Arabidopsis thaliana GN=SCPL14 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.251e-12
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 2
Query:    5 WIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHTGPEYKPKECLAMIDRWFASYPL 214
            WI+SLN +I   W+PW++  QVAGY   Y  K    +T ATVKG GHT  EYKP+E   +  RW +  PL
Sbjct:  371 WIRSLNYSITEKWRPWMILDQVAGYTKTYANK----MTLATVKGGGHT-LEYKPEENSILFKRWISGQPL 435          
The following BLAST results are available for this feature:
BLAST of FC872458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SCP8_ARATH1.093e-1245.71Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP2_ARATH1.093e-1247.14Serine carboxypeptidase-like 2 OS=Arabidopsis thal... [more]
SCP52_ARATH1.427e-1245.71Putative serine carboxypeptidase-like 52 OS=Arabid... [more]
SCP1_ARATH1.427e-1248.57Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
SCP5_ARATH3.179e-1245.71Serine carboxypeptidase-like 5 OS=Arabidopsis thal... [more]
SCP3_ARATH3.179e-1244.29Serine carboxypeptidase-like 3 OS=Arabidopsis thal... [more]
SCP11_ARATH3.179e-1248.57Serine carboxypeptidase-like 11 OS=Arabidopsis tha... [more]
SCP4_ARATH4.152e-1247.14Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
SCP15_ARATH7.083e-1248.57Serine carboxypeptidase-like 15 OS=Arabidopsis tha... [more]
SCP14_ARATH9.251e-1248.57Serine carboxypeptidase-like 14 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BG01ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BG01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872458 ID=FC872458; Name=FC872458; organism=Citrus clementina; type=EST; length=427bp
GGGATGGATAAAGTCATTAAACTTGACGATTGAAACTGGCTGGCAGCCGT
GGTTGGTGGAAAGTCAAGTTGCAGGATATTGGTACCGTTACAAGGGAAAG
AACAATTATCATTTGACATTTGCCACAGTAAAGGGAGCAGGTCATACAGG
TCCAGAGTACAAGCCTAAGGAATGTCTTGCAATGATCGACAGGTGGTTCG
CATCCTATCCTCTCTAGAGCCACGTTCATATAATTATTAAGTTTTCGAGA
TTGAAAAATAAATGTGGAAGTTAAGTGGCTGATGGCGTTGTAAACACCGA
TGAAATTATTTATGTTTGGCTTTACCAAACTTATGATCTGAAAAACTAGT
ATTGCAAGAGCCTTGATGCTCCTATTTGCTTTTTTAAAAATGTCGCTCCA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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