FC872504

Overview
NameFC872504
Unique NameFC872504
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC872504 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 2 
Query:    5 VSPDLCCQXXXXXXXXXXXXESIYGSKFAVENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIAACGQL 331
            + P   CQ            +SIYG KF  ENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IA CGQL
Sbjct:   56 IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of FC872504 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 2 
Query:    5 VSPDLCCQXXXXXXXXXXXXESIYGSKFAVENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIAACGQL 331
            + P   CQ            +SIYG KF  ENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IA CGQL
Sbjct:   56 IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of FC872504 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 2 
Query:    5 VSPDLCCQXXXXXXXXXXXXESIYGSKFAVENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIAACGQL 331
            + P   CQ            +SIYG KF  ENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IA CGQL
Sbjct:   56 IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of FC872504 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 2 
Query:    5 VSPDLCCQXXXXXXXXXXXXESIYGSKFAVENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIAACGQL 331
            + P   CQ            +SIYG KF  ENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IA CGQL
Sbjct:   56 IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of FC872504 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 2 
Query:    5 VSPDLCCQXXXXXXXXXXXXESIYGSKFAVENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIAACGQL 331
            + P   CQ            +SIYG KF  ENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IA CGQL
Sbjct:   56 IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of FC872504 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 2 
Query:    5 VSPDLCCQXXXXXXXXXXXXESIYGSKFAVENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIAACGQL 331
            + P   CQ            +SIYG KF  ENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IA CGQL
Sbjct:   56 IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of FC872504 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 2 
Query:    5 VSPDLCCQXXXXXXXXXXXXESIYGSKFAVENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIAACGQL 331
            + P   CQ            +SIYG KF  ENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IA CGQL
Sbjct:   56 IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of FC872504 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 2 
Query:    5 VSPDLCCQXXXXXXXXXXXXESIYGSKFAVENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIAACGQL 331
            + P   CQ            +SIYG KF  ENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IA CGQL
Sbjct:   56 IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of FC872504 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 2 
Query:    5 VSPDLCCQXXXXXXXXXXXXESIYGSKFAVENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIAACGQL 331
            + P   CQ            +SIYG KF  ENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IA CGQL
Sbjct:   56 IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of FC872504 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 2 
Query:    5 VSPDLCCQXXXXXXXXXXXXESIYGSKFAVENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIAACGQL 331
            + P   CQ            +SIYG KF  ENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IA CGQL
Sbjct:   56 IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
The following BLAST results are available for this feature:
BLAST of FC872504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
PPIA_PONPY6.203e-3562.39Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PAPAN6.203e-3562.39Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR6.203e-3562.39Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]
PPIA_PANPA6.203e-3562.39Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU6.203e-3562.39Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY6.203e-3562.39Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE6.203e-3562.39Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA6.203e-3562.39Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN6.203e-3562.39Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO6.203e-3562.39Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AF12ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3AF12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872504 ID=FC872504; Name=FC872504; organism=Citrus clementina; type=EST; length=598bp
GGGGGTTTCCCCGGATTTATGTTGCCAGGGGGGTGACTTCACCGCCGGAA
ACGGAACCGGAGGCGAATCAATCTACGGCTCAAAATTCGCCGTTGAGAAC
TTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGG
TCCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGT
GGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGAC
GTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAGGACCAACAA
GCCCGTCGTGATCGCTGCTTGCGGTCAATTGTCTTAGATTTGATCATGAT
AATGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGATGGTGATTA
TGTTATCTATTATTATGTGGCCGTGTCTGTAGGACTTTTAATCTTTATCT
AATTTTCCTGCTATGTTACTTGTTCGGGTTGGATCGGGTCTCCGGTGGTG
GTTCTTGATGAACTGTTTTTTATGTCTTTCTATGAGCTGCCTTTTTAAAT
AAGATAGGGCTTGTCTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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