FC872636

Overview
NameFC872636
Unique NameFC872636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length864
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.814e-20
Identity = 64/198 (32.32%), Postives = 94/198 (47.47%), Query Frame = 3
Query:  249 AGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVG------IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAAL 824
            A + EF  TF+FL+   +     +   +  +         +  IA  FG  +   ++C AG+SGG +NPAV+  L LAR +S T  V   + Q +  +            +       AN L  G S+  GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NP+RSLGAA+
Sbjct:   51 AAVGEFCGTFMFLWCAYVICNVANHDVALVAAPDGSHPGQLIMIAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVLF----ANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAV 239          
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.287e-20
Identity = 66/209 (31.58%), Postives = 105/209 (50.24%), Query Frame = 3
Query:  243 YRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG--GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863
            +R  + E V TF  +++ V    G + S S      +  IA+ FG  +  +      +SG HINPAVT G  +  ++S+  A FY+I+QC+GAI GAAV+K    +   + GG  G +      +    +  E + TF+LV+ V + +D  R      +   APL +G A+   HL  I ++G  +NP+RS G A++      W   W+
Sbjct:   23 WRMLLGELVGTFFLIFVGV----GSTTSGS------VPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIK---VALDGVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVVQG---VWTYHWV 211          
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.212e-20
Identity = 72/215 (33.49%), Postives = 107/215 (49.77%), Query Frame = 3
Query:  246 RAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGA------EIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863
            RA +AEF +TF+F++    + + + K    S  S   +  +A A    +FA V  +  +SGGH+NPAV+FG  +  ++S+  AV+Y I Q LG+I  A V++              NM   G+    G+G       E+V TF L+YTV+ +A D KR A    V  +APL IG  V    L   P  G  +NP+ + G +L+      W   WI
Sbjct:   21 RASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTN----------NMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV---GWQWHQHWI 218          
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.212e-20
Identity = 74/225 (32.89%), Postives = 111/225 (49.33%), Query Frame = 3
Query:  237 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGI--QGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANM-LSKGY-SKGDGLGA------------EIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863
            S  +  +AEF+ TF      VL   G +   +    +GI   G++ AFG  +  + +    ISG HINPAV+ GL+ A++   T  + Y+  Q LG I GA V+       Y + GG A   LS G+ S G GL +            E+V TF+ +  +  +TD +           AP+ IG ++ L+HL +IP+T T +NP+RS G AL    D A  + W+
Sbjct:    2 SLVKRSVAEFIGTFWL----VLGGCGAAVLAAAFPNLGIGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGAGVL-------YLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTDRRAPKG------FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPALFVG-DWAIAELWL 208          
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: AQPZ2_AGRT5 (Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.401e-19
Identity = 61/166 (36.75%), Postives = 88/166 (53.01%), Query Frame = 3
Query:  345 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAV--VKGFQKSQYEMLGGGANMLSK----GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAAL 824
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +   ++ V Y+I Q  GAI  AA   V    K+  ++ G  +N   +    GYS    L  EI+ T   +  +  +T  +  A        AP+ IG A+ L+HL +IP+T T +NP+RS G AL
Sbjct:   34 IGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQAL 193          
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.829e-19
Identity = 74/224 (33.04%), Postives = 116/224 (51.79%), Query Frame = 3
Query:  231 SWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQY--------EMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYN--KDQA--WDDP 857
            S +  R  ++EF++TF F+   V +VM   K  +       G+   A A    + + VY +  +SGGH+NPAVTF + +A ++S+ TA+FY   Q + ++    V+K     Q+        EM G GA++L            E V  FVLVYTVF+A+D +R      +P+ + P+ IGF      LA  P +G  +NP+ + G+A++Y   K+QA  W  P
Sbjct:   18 SMNALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVL------------EGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQAVYWVGP 224          
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.829e-19
Identity = 65/199 (32.66%), Postives = 93/199 (46.73%), Query Frame = 3
Query:  249 AGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVG-------IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAAL 824
            A + EF  TF+FL+   + +  V+      +T         +  IA  FG  +   ++C AG+SGG +NPAV+  L LAR +S    V     Q +  +            +        N L  G S+  GL  E+ GT VL  TV      KR         +A LPIG ++F+ H+A    TGTG+NP+RSLGAA+
Sbjct:   50 AAVGEFCGTFMFLWCAYV-ICNVANHDVALTTEPEGSHPGQLIMIALGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTPGKVLF----TNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAV 238          
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.829e-19
Identity = 60/167 (35.93%), Postives = 83/167 (49.70%), Query Frame = 3
Query:  345 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVV-------KGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAAL 824
            +G  G+A AFG  +  + Y    ISG H+NPAV+ GL+   +        Y++ Q LGAI   AV+        GF  ++     G A     GYS    L  E+V T   +  +  ATD +  A        APL IG A+ L+HL +IP+T T +NP+RS G AL
Sbjct:   33 IGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPGGYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVAL 193          
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.120e-19
Identity = 72/222 (32.43%), Postives = 105/222 (47.30%), Query Frame = 3
Query:  216 PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG---GANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863
            PGE S     RA  AEF +  +F++    + M   K       +  G+   + +    +F  V   A +SGGH+NPAVTFG F+   ++L  A+ Y I Q LGA+    ++K          GG    A  LS G +  + +  EIV TF LVYTV+ +A D K+      + I+APL IG  V    L      G  +NP+ S G A++      W + W+
Sbjct:   11 PGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLK-------VSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWV 218          
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.323e-19
Identity = 71/222 (31.98%), Postives = 108/222 (48.65%), Query Frame = 3
Query:  216 PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDG-LGA---EIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863
            P E +     +A +AEF++T +F+     + M  +K     +T   G+   A A    +F  V   A ISGGH+NPAVTFG F+   ++L   + Y I Q LG++    ++K           GG  + + G S G G L A   EIV TF LVYTV++     +N     +  +AP+ IGF V    LA    +G  +NP+ + G A++      W + W+
Sbjct:   11 PDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK--------FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKN---GSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWV 218          
The following BLAST results are available for this feature:
BLAST of FC872636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
AQY1_YEAST4.814e-2032.32Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQP_DROME6.287e-2031.58Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIPA_PHAVU8.212e-2033.49Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
AQPZ_GLOVI8.212e-2032.89Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]
AQPZ2_AGRT51.401e-1936.75Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain... [more]
TIP51_ARATH1.829e-1933.04Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
AQY2_YEAST1.829e-1932.66Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQPZ_CHRVO1.829e-1935.93Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
TIP13_ARATH3.120e-1932.43Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP11_ARATH5.323e-1931.98Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CH07ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1CH07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872636 ID=FC872636; Name=FC872636; organism=Citrus clementina; type=EST; length=864bp
GGGGGAGCCCGTTGTGCCATTTATTTATTCTATTCACTCCCAAGAAACTT
GAACCTATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGA
AGAGGATGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTG
GAACCGCGGCTCAAACTCAGGATGTGAAGGATTACACGGAGCCACCTCCG
GCGCCGCTCTTCGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGC
TGGCATTGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTC
TAACAGTGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGA
ATCCAGGGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTA
CTGCACTGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCG
GGCTGTTCTTGGCCCGAAAGCTGTCGCTTACCACGGCAGTTTTTTACATG
ATAATGCAGTGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCTT
TCAGAAAAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCA
AAGGCTACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTT
GTTCTTGTTTACACTGTCTTCTCGGCCACTGATGCCAAGCGCAATGCCCG
CGATTCTCATGTTCCTATATTGGCACCCCTGCCCATAGGATTTGCTGTGT
TTTTGGTGCACTTGGCAACAATTCCTATCACAGGAACAGGCATTAACCCA
TCTAGGAGTCTTGGCGCAGCTCTGATATACAACAAGGACCAAGCCTGGGA
TGATCCTTGGATTT
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