FC872661

Overview
NameFC872661
Unique NameFC872661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.619e-26
Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 412
            +ECTAEEAYT++ G A++ASGSPF  FE   + + PGQ NNAYIFPG+ LG I+     V +D+           VT+++   G +YP  K I++IS  IA E+A   Y+ G A   P P+DL KY  + +Y+  Y
Sbjct:  477 AECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEY 612          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.467e-26
Identity = 63/136 (46.32%), Postives = 79/136 (58.09%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 412
            +ECTAE+AY W+ GR IFASGSPF P EY    FVPGQ NN YIFPGLGL   +  A  V D M           V       G +YP  ++I++IS  IA +V  KAYE G+A +LP P ++    +S  Y P+Y
Sbjct:  405 AECTAEQAYQWTDGRCIFASGSPFKPVEYKGKTFVPGQGNNMYIFPGLGLAASVCEAKHVTDAMIITAAKTLASFVEDSEVLTGKIYPGLQHIREISTRIAVKVIEKAYEEGMA-QLPRPDNIEALVKSRQYVPSY 539          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.834e-26
Identity = 57/140 (40.71%), Postives = 82/140 (58.57%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTY 421
            +ECTAE+ Y +++GR IFASGSPFDP          PGQ NN+Y+FPG+ LG+I  G   + DD+          +V++EN  +G LYPP   I+++S  IA  +A +AY    A+  P P+DL  +  S +YS  Y  +
Sbjct:  402 AECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCF 541          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.895e-25
Identity = 58/137 (42.34%), Postives = 79/137 (57.66%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDN-VFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 412
            +ECTAEEAYT ++GR +FASGSPF P +  D  VF PGQ NN YIFPG+ L +I+     + D +          Q+T E   +G LYPP  NI+++S +IA +V    Y   +A R P P+D  KY +   +   Y
Sbjct:  426 AECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEY 562          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.938e-25
Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDN-VFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTY 421
            +ECTAE+ Y  ++GR IFASGSPF      D   F+PGQ NNAY+FPG+ LG+I  G   + D++          +V++++  +G LYPP   I+ +S  IA +V   AY+  LA+  P PKD   +  S +Y+P Y ++
Sbjct:  448 AECTAEKCYRVTEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSF 587          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDN-VFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTY 421
            +ECTAE+ Y  ++GR IFASGSPF      D   F PGQ NNAY+FPG+ LG+I  G   + D++          +V++++  +G LYPP   I+ +S  IA +V   AY+  LA+  P PKD   + +S +Y+P Y ++
Sbjct:  448 AECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFTPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAVKVLDYAYKHNLASYYPEPKDKEAFVKSLIYTPDYDSF 587          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24
Identity = 55/137 (40.15%), Postives = 82/137 (59.85%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDN-VFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 412
            +EC+AEE Y  ++GRAIFASGSPFDP    D     PGQ NN+Y+FPG+ LG++  G   ++D +          QV+ ++ ++G LYPP   I+ +S  IA ++   AY+  +AT  P P++  ++  S MYS  Y
Sbjct:  413 AECSAEECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHINDSVFLTTAEVISQQVSDKHLEEGRLYPPLNTIRDVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMYSTNY 549          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24
Identity = 57/137 (41.61%), Postives = 82/137 (59.85%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDN-VFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 412
            +ECTAE+AYT ++GR +FASGSPF+P +  D  VF PGQ NNAYIFPG+ L +I+  A  + D +          Q+T     +G LYP   NI+++SA+IA ++A   Y   +A R P P+D  +Y    ++   Y
Sbjct:  426 AECTAEDAYTLTEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAKALTTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEYLYANKMAFRYPEPEDKARYVRERIWRSNY 562          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.075e-23
Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDN-VFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 412
            +EC+A+E Y  ++GRAIFASGSPFDP    D     PGQ NN+Y+FPG+ LG++  G   + D +          QV+ ++  +G LYPP   I+ +S  IA ++   AY+  +AT  P P++  ++  S MYS  Y
Sbjct:  413 AECSADECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTREVISQQVSDKHLQEGRLYPPLNTIRGVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMYSTNY 549          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.539e-23
Identity = 55/137 (40.15%), Postives = 76/137 (55.47%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 412
            +ECTAE  YT +QGRAIFASGSPFDP          PGQ NN+Y+FPG+ L ++  G   + D +          QV+ ++ ++G LYPP   I+ +S  IA ++   AY+   AT  P P +   +  S MYS  Y
Sbjct:  399 AECTAERGYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALAVVACGLRHITDKIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMYSTDY 535          
The following BLAST results are available for this feature:
BLAST of FC872661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAOM_ASCSU2.619e-2643.38NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]
MAOX_DICDI4.467e-2646.32NADP-dependent malic enzyme OS=Dictyostelium disco... [more]
MAOX_COLLI5.834e-2640.71NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOM_HUMAN2.895e-2542.34NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAON_HUMAN4.938e-2540.00NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAON_MOUSE6.450e-2540.00NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAOX_RAT1.877e-2440.15NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAOM_MOUSE2.451e-2441.61NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAOX_MOUSE2.075e-2339.42NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]
MAOX_PIG3.539e-2340.15NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872661 ID=FC872661; Name=FC872661; organism=Citrus clementina; type=EST; length=732bp
GGGGTCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAG
CCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAAT
GTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGACTTGG
TTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCATGATGACATGCTTC
TGGCAGCAGCGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGAC
AAGGGACTCCTTTACCCTCCATTTAAGAACATCAAAAAGATTTCAGCTCA
TATTGCTGCAGAGGTAGCTGCAAAAGCATACGAACTTGGTTTGGCAACTC
GCCTCCCTCCGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTAC
AGCCCTGCTTATCGAACCTACCGGTGAAATGGGAGGAATTCAATACAATT
GCTGTTTTGGAGTTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTT
TTTACCTTGGGCTCCTTTTTAAAATGGTACTCCCTCTTCCTCCTTTCTTC
TGTGAAGTCACATAAGTTACCCTGGTGGGTAAGAATCAGCATGGTGGGTA
GTGGTAGGTGCATCTAGCAAAGTAAAAAAATATAGCATGAAAAATGATGT
TGTTGTGGACTTGGAAATTCTACATGAAATGAAATTCAGGTTAACCGTTC
ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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