FC872661

Overview
NameFC872661
Unique NameFC872661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 49/140 (35.00%), Postives = 75/140 (53.57%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E T ++   W+ G+A+ A+GSPF+P       F   Q NN++IFPG+GLG++  GA RV D+M                   G L P  ++I+ +S +IA  VA  A + GLA  LP   +L++ + E+  + P YR Y+
Sbjct:  421 EATPKDILNWTSGQALVATGSPFEPVIVNGETFEIAQCNNSFIFPGIGLGVLSCGARRVSDEMLMASSRALAECSPLGKDGVGSLLPRLEDIQTVSKYIAFAVAKAAIDQGLA--LPCTDELLQQSIEANFWEPEYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_BDEBA (NAD-dependent malic enzyme OS=Bdellovibrio bacteriovorus GN=sfcA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W+ G+A+ A+GSPF P    D ++   Q NN+YIFPG+GLG++  GA RV D M                  KG L P    I+K+S  IA  VA  A    +A ++   ++L+   +   + P YR+Y+
Sbjct:  424 EATPADILRWTDGKALVATGSPFMPVHMNDQIYPIAQCNNSYIFPGIGLGVLACGARRVTDSMLMAASSALADCSPLAQNGKGALLPELSQIEKVSRTIAFAVAKAAQADEVAVKV-SDEELLSLIDKNYWYPKYRSYK 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_PSYA2 (NAD-dependent malic enzyme OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 49/139 (35.25%), Postives = 74/139 (53.24%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T +E  +WS+G+AI A+GSPF    + D  F   Q NN+YIFPG+GLG++ + A  + D+M             +     G + PP K I++IS  IA  VA +A E  LA  +   ++L +  ++  + P Y  YR
Sbjct:  419 EATPQEVTSWSRGKAIVATGSPFPNTTFEDQSFEISQCNNSYIFPGIGLGVLAAHATGISDNMLMSASQALADISMEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPV-TAENLERRLKANFWLPRYHNYR 556          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHELP (NAD-dependent malic enzyme OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 49/140 (35.00%), Postives = 74/140 (52.86%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E T ++   W++G+A+ A+GSPF+P    +  +   Q NN+YIFPG+GLG++ SGA RV ++M                  +G L P  ++I  +S HIA  V   A E G A  LP   +L+  A E   ++  YR Y+
Sbjct:  421 EATPKDILHWTKGQALVATGSPFEPVVIEEQTYEIAQCNNSYIFPGIGLGVLASGAKRVSNEMLMASSRALAECSPLAKDGEGSLLPALEDIHSVSKHIAFAVGKVAIEQGHA--LPASDELLMQAIEDNFWTAEYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15
Identity = 49/139 (35.25%), Postives = 71/139 (51.08%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W+ G+A+ A+GSPF+P    D  +   Q NN+YIFPG+GLG++  GA RV ++M                   G L PP + I  +S HIA  VA  A E G A      + L++  E+  + P YR Y+
Sbjct:  421 EATPKDILHWTSGQALVATGSPFEPVVVDDVTYDIAQCNNSYIFPGIGLGVLACGANRVSNEMLMASSRALAECSPLAKDGSGPLLPPLEEIHDVSKHIAFAVAKVAIEQGHALD-TTDELLMQSIEANFWYPEYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15
Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W+ G A+ A+GSPF+P  +    +   Q NN+YIFPG+GLG++   A RV D+M                   G L PP ++I+K+S  IA  VA KA E G A +    + L K  ++  +   YR Y+
Sbjct:  421 EATPADIINWTDGNALVATGSPFEPVVHNGKTYPIAQCNNSYIFPGIGLGILAVNARRVTDEMLMASSRALAECSPLAINGHGALLPPLEDIQKVSRKIAFAVAKKAIEQGKAPKNSDERILDK-IDANFWQSDYRNYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15
Identity = 49/139 (35.25%), Postives = 70/139 (50.36%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E    +   W+ GRA+ A+GSPF P  Y   ++   Q NN+YIFPG+GLG+I SGA RV D+M                     L P   +I+ +S  IA +VA  A E G+A  +   + L++  E   + P YR Y+
Sbjct:  425 EALPSDVIQWTNGRALIATGSPFAPVNYQGKLYNISQCNNSYIFPGIGLGVIASGAKRVTDNMLMASSNALADCSPLLQNPNADLLPAIADIQDVSKRIAFKVAKAAIEDGVALNM-SDEVLLQNIEKEFWKPKYRGYK 562          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_VIBVU (NAD-dependent malic enzyme OS=Vibrio vulnificus GN=sfcA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.051e-15
Identity = 50/140 (35.71%), Postives = 69/140 (49.29%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E    +   W+ G A+ A+GSPFDP  +    +   Q NN+YIFPG+GLG++   A RV D+M                  KG L PP + I  +S  IA  VA KA E G+A  +    D ++ A E   + P YR Y+
Sbjct:  421 EAVPADIIRWTNGDALVATGSPFDPVIHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGKGALLPPLEEIHTVSKRIAYAVAKKAIEQGVALEI--ADDALQVAIEQHFWQPVYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SERP5 (NAD-dependent malic enzyme OS=Serratia proteamaculans (strain 568) GN=sfcA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.051e-15
Identity = 49/139 (35.25%), Postives = 68/139 (48.92%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E   E+   W++G A+ A+GSPF P  Y +      Q NN+YIFPG+GLG++ SGA RV D M                   G L P   +I+ +S  IA EV   A   G+A  +   + L K  E   + P YR+Y+
Sbjct:  424 EARPEDIINWTEGAALVATGSPFAPVHYKEQQIPIAQCNNSYIFPGIGLGVLASGATRVTDAMLMAASRALAECSPLATDGHGALLPDIDDIQGVSKCIAMEVGKAAQLQGMAV-VTSEEALSKAIEHNFWRPQYRSYK 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_PSE14 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sfcA PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.051e-15
Identity = 49/139 (35.25%), Postives = 66/139 (47.48%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T EE   W+ G A+ A+GSPF P E         Q NN+YIFPG+GLG++   A R+ D M                     + PP K I+++S  IA  VA +A   GLA      + L++  E   + P YR YR
Sbjct:  422 EATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRMLMAASNALAECSPMVTGQGDAVLPPLKEIQQVSRKIALAVAKEAQAEGLALE-TSEEALLEAIERNFWLPGYRAYR 559          
The following BLAST results are available for this feature:
BLAST of FC872661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAO1_SHEFN1.592e-1535.00NAD-dependent malic enzyme OS=Shewanella frigidima... [more]
MAO1_BDEBA1.592e-1533.81NAD-dependent malic enzyme OS=Bdellovibrio bacteri... [more]
MAO1_PSYA22.080e-1535.25NAD-dependent malic enzyme OS=Psychrobacter arctic... [more]
MAO1_SHELP2.716e-1535.00NAD-dependent malic enzyme OS=Shewanella loihica (... [more]
MAO1_SHEAM3.547e-1535.25NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAO11_PHOPR3.547e-1534.53NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_ACIAD4.633e-1535.25NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_VIBVU6.051e-1535.71NAD-dependent malic enzyme OS=Vibrio vulnificus GN... [more]
MAO1_SERP56.051e-1535.25NAD-dependent malic enzyme OS=Serratia proteamacul... [more]
MAO1_PSE146.051e-1535.25NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872661 ID=FC872661; Name=FC872661; organism=Citrus clementina; type=EST; length=732bp
GGGGTCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAG
CCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAAT
GTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGACTTGG
TTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCATGATGACATGCTTC
TGGCAGCAGCGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGAC
AAGGGACTCCTTTACCCTCCATTTAAGAACATCAAAAAGATTTCAGCTCA
TATTGCTGCAGAGGTAGCTGCAAAAGCATACGAACTTGGTTTGGCAACTC
GCCTCCCTCCGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTAC
AGCCCTGCTTATCGAACCTACCGGTGAAATGGGAGGAATTCAATACAATT
GCTGTTTTGGAGTTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTT
TTTACCTTGGGCTCCTTTTTAAAATGGTACTCCCTCTTCCTCCTTTCTTC
TGTGAAGTCACATAAGTTACCCTGGTGGGTAAGAATCAGCATGGTGGGTA
GTGGTAGGTGCATCTAGCAAAGTAAAAAAATATAGCATGAAAAATGATGT
TGTTGTGGACTTGGAAATTCTACATGAAATGAAATTCAGGTTAACCGTTC
ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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