FC872661

Overview
NameFC872661
Unique NameFC872661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO11_VIBVY (NAD-dependent malic enzyme 1 OS=Vibrio vulnificus (strain YJ016) GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.051e-15
Identity = 50/140 (35.71%), Postives = 69/140 (49.29%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E    +   W+ G A+ A+GSPFDP  +    +   Q NN+YIFPG+GLG++   A RV D+M                  KG L PP + I  +S  IA  VA KA E G+A  +    D ++ A E   + P YR Y+
Sbjct:  421 EAVPADIIRWTNGDALVATGSPFDPVIHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGKGALLPPLEEIHTVSKRIAYAVAKKAIEQGVALEI--ADDALQVAIEQHFWQPVYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_VIBCH (NAD-dependent malic enzyme OS=Vibrio cholerae GN=sfcA PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15
Identity = 48/139 (34.53%), Postives = 68/139 (48.92%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E    +   W+ G A+ A+GSPFDP  +    +   Q NN+YIFPG+GLG++ + A RV D+M                   G L PP ++I  +S  IA  VA KA E G+A  +   + L    E   + P YR Y+
Sbjct:  421 EALPSDIIRWTNGEALVATGSPFDPVLHEGKTYPIVQCNNSYIFPGIGLGVLAANARRVTDEMLMESSRALASCSPLAINGHGPLLPPLESIHSVSKKIAFAVAKKAIEQGVAPEV-TDEALEASIEQHFWQPVYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_VIBC3 (NAD-dependent malic enzyme OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sfcA PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15
Identity = 48/139 (34.53%), Postives = 68/139 (48.92%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E    +   W+ G A+ A+GSPFDP  +    +   Q NN+YIFPG+GLG++ + A RV D+M                   G L PP ++I  +S  IA  VA KA E G+A  +   + L    E   + P YR Y+
Sbjct:  421 EALPSDIIRWTNGEALVATGSPFDPVLHEGKTYPIVQCNNSYIFPGIGLGVLAANARRVTDEMLMESSRALASCSPLAINGHGPLLPPLESIHSVSKKIAFAVAKKAIEQGVAPEV-TDEALEASIEQHFWQPVYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15
Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E T ++   W+ G+A+ A+GSPF+P       F   Q NN++IFPG+GLG++ SGA  V D M                   G L P  ++I  +S HIA  V   A E GL   LP   ++++ + E   +SP YR Y+
Sbjct:  421 EATPKDILHWTSGQALVATGSPFEPVVVDGETFEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLT--LPMSDEILQQSIEGNFWSPEYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15
Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E T ++   W+ G+A+ A+GSPF+P       F   Q NN++IFPG+GLG++ SGA  V D M                   G L P  ++I  +S HIA  V   A E GL   LP   ++++ + E   +SP YR Y+
Sbjct:  421 EATPKDILHWTSGQALVATGSPFEPVVVDGETFEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLT--LPMSDEILQQSIEGNFWSPEYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15
Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T +E   WS+G+AI A+GSPF    +    +   Q NN+YIFPG+GLG++ + A  + D+M             +     G + PP K I++IS  IA  VA +A E  LA  +   ++L +  ++  + P YR YR
Sbjct:  419 EATPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDNMLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPV-TAENLERRLKANFWLPKYRDYR 556          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_PSEU2 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sfcA PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15
Identity = 49/139 (35.25%), Postives = 66/139 (47.48%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T EE   W+ G A+ A+GSPF P E         Q NN+YIFPG+GLG++   A R+ D M                     + PP K I+++S  IA  VA +A   GLA      + L++  E   + P YR YR
Sbjct:  422 EATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRMLMAASNALAECSPMVTGKGDAVLPPLKEIQQVSRKIALAVAREAQAEGLALE-TTEEALLEAIERNFWLPGYRAYR 559          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ERWT9 (NAD-dependent malic enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15
Identity = 49/139 (35.25%), Postives = 68/139 (48.92%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W+ G A+ A+GSPF P  + D  +   Q NN+YIFPG+GLG+I SGA RV D M               N  +G + P   +I+ +S  IA  V   A   G+A  +     L K   +  + P YR YR
Sbjct:  424 EATPQDIMAWTDGCALVATGSPFSPVSWKDKTYPIAQCNNSYIFPGIGLGVIASGASRVTDSMLMAASRALADCSPLVNDGEGPVLPEVNDIQGVSKIIAMAVGKAAQLAGVAV-VTSEDVLSKAIAANFWLPQYRNYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_VIBHB (NAD-dependent malic enzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14
Identity = 47/139 (33.81%), Postives = 67/139 (48.20%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W+ G A+ A+GSPF+P  +    +   Q NN+YIFPG+GLG++   A RV D+M                   G L PP + I  +S  IA  VA KA E G+A  +   + L    +   + P YR Y+
Sbjct:  421 EATPNDIIRWTNGEALVATGSPFEPVVHEGRSYPIAQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGNGALLPPLEEIHLVSKKIAFAVAKKAIEQGVALEI-TDEALNDAIDQAFWQPVYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_PSESM (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. tomato GN=sfcA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14
Identity = 49/139 (35.25%), Postives = 65/139 (46.76%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T EE   W+ G A+ A+GSPF P E         Q NN+YIFPG+GLG++   A R+ D M                     + PP K I+++S  IA  VA +A   GLA      + L+   E   + P YR YR
Sbjct:  422 EATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRMLMAASNALAECSPMVTGQGDAVLPPLKEIQQVSRKIALAVAKEAQAEGLALE-TSEEALLAAIERNFWLPGYRAYR 559          
The following BLAST results are available for this feature:
BLAST of FC872661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAO11_VIBVY6.051e-1535.71NAD-dependent malic enzyme 1 OS=Vibrio vulnificus ... [more]
MAO1_VIBCH7.903e-1534.53NAD-dependent malic enzyme OS=Vibrio cholerae GN=s... [more]
MAO1_VIBC37.903e-1534.53NAD-dependent malic enzyme OS=Vibrio cholerae sero... [more]
MAO1_SHEB87.903e-1535.00NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB27.903e-1535.00NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_PSYCK7.903e-1534.53NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO1_PSEU27.903e-1535.25NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_ERWT97.903e-1535.25NAD-dependent malic enzyme OS=Erwinia tasmaniensis... [more]
MAO1_VIBHB1.032e-1433.81NAD-dependent malic enzyme OS=Vibrio harveyi (stra... [more]
MAO1_PSESM1.032e-1435.25NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872661 ID=FC872661; Name=FC872661; organism=Citrus clementina; type=EST; length=732bp
GGGGTCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAG
CCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAAT
GTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGACTTGG
TTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCATGATGACATGCTTC
TGGCAGCAGCGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGAC
AAGGGACTCCTTTACCCTCCATTTAAGAACATCAAAAAGATTTCAGCTCA
TATTGCTGCAGAGGTAGCTGCAAAAGCATACGAACTTGGTTTGGCAACTC
GCCTCCCTCCGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTAC
AGCCCTGCTTATCGAACCTACCGGTGAAATGGGAGGAATTCAATACAATT
GCTGTTTTGGAGTTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTT
TTTACCTTGGGCTCCTTTTTAAAATGGTACTCCCTCTTCCTCCTTTCTTC
TGTGAAGTCACATAAGTTACCCTGGTGGGTAAGAATCAGCATGGTGGGTA
GTGGTAGGTGCATCTAGCAAAGTAAAAAAATATAGCATGAAAAATGATGT
TGTTGTGGACTTGGAAATTCTACATGAAATGAAATTCAGGTTAACCGTTC
ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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