FC872661

Overview
NameFC872661
Unique NameFC872661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.884e-23
Identity = 53/137 (38.69%), Postives = 81/137 (59.12%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDN-VFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 412
            +EC+AE+ Y  ++GRAIFASGSPFDP    +     PGQ NN+Y+FPG+ LG++  G  ++ D++          QV+ ++ ++G LYPP   I+ +S  IA ++   AY+   AT  P P++   +  S MYS  Y
Sbjct:  413 AECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDY 549          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.662e-20
Identity = 53/137 (38.69%), Postives = 73/137 (53.28%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPP-KDLVKYAESCMYSPAY 412
            SECTAEEA  ++ G  IFASGSPFDP E+        Q NN+Y FPG+GLGL+ S A RV  +             T E    G ++P   N++ +S  +  EVA  A  + +AT+ PP   D  ++ +  M+ P Y
Sbjct:  448 SECTAEEAVEFTDGNLIFASGSPFDPVEWKGKTIQTNQCNNSYSFPGIGLGLVSSRATRVPFETFQVCARVIASLGTPEMLATGKIFPDLDNLRAVSLEVGIEVAKMAERMNIATQFPPKGMDWREWLKHNMWQPEY 584          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W+ G A+ A+GSPF P    +  +   Q NNAYIFPG+GLG+I SGA+RV D+M               N   GL+ PP  +I+++S  IA  V   A + G+A +    + L++  E   + P YR+YR
Sbjct:  425 EATPHDILNWTDGAALVATGSPFQPVTVKEKTYPIAQCNNAYIFPGIGLGIISSGALRVTDEMMMAASEALASHSPLVNTGSGLVLPPLTDIQQVSKDIAFAVGKMAQQQGVAVK-TSAEALLQAIEENFWLPEYRSYR 562          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_COLP3 (NAD-dependent malic enzyme OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sfcA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 52/139 (37.41%), Postives = 70/139 (50.36%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W+QG+ I A+GSPFDP EY    F   Q NN+YIFPG+GL ++ +   R+ D M               N +   L PP  +I ++S  IA  +A  AY+ GLA  L   + L K  E   + P YR YR
Sbjct:  421 EATPSQVINWTQGQVIIATGSPFDPIEYQGKTFPIAQCNNSYIFPGVGLAVVAANISRITDGMLQVASETLAAASPLANGESDELLPPLTSIAQLSRDIAFAIAKVAYKQGLALELTDDELLAK-IEHNFWKPEYRQYR 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALPA (NAD-dependent malic enzyme OS=Salmonella paratyphi A GN=sfcA PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALHS (NAD-dependent malic enzyme OS=Salmonella heidelberg (strain SL476) GN=sfcA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
The following BLAST results are available for this feature:
BLAST of FC872661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAOX_HUMAN7.884e-2338.69NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOH_NEOFR3.662e-2038.69Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_ENTS83.100e-1936.69NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAO1_COLP36.907e-1937.41NAD-dependent malic enzyme OS=Colwellia psychreryt... [more]
MAO1_SALTY1.539e-1836.69NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI1.539e-1836.69NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV1.539e-1836.69NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB1.539e-1836.69NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALPA1.539e-1836.69NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALHS1.539e-1836.69NAD-dependent malic enzyme OS=Salmonella heidelber... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB3BG03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872661 ID=FC872661; Name=FC872661; organism=Citrus clementina; type=EST; length=732bp
GGGGTCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAG
CCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAAT
GTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGACTTGG
TTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCATGATGACATGCTTC
TGGCAGCAGCGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGAC
AAGGGACTCCTTTACCCTCCATTTAAGAACATCAAAAAGATTTCAGCTCA
TATTGCTGCAGAGGTAGCTGCAAAAGCATACGAACTTGGTTTGGCAACTC
GCCTCCCTCCGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTAC
AGCCCTGCTTATCGAACCTACCGGTGAAATGGGAGGAATTCAATACAATT
GCTGTTTTGGAGTTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTT
TTTACCTTGGGCTCCTTTTTAAAATGGTACTCCCTCTTCCTCCTTTCTTC
TGTGAAGTCACATAAGTTACCCTGGTGGGTAAGAATCAGCATGGTGGGTA
GTGGTAGGTGCATCTAGCAAAGTAAAAAAATATAGCATGAAAAATGATGT
TGTTGTGGACTTGGAAATTCTACATGAAATGAAATTCAGGTTAACCGTTC
ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top