FC872661

Overview
NameFC872661
Unique NameFC872661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALCH (NAD-dependent malic enzyme OS=Salmonella choleraesuis GN=sfcA PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIVWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALAR (NAD-dependent malic enzyme OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sfcA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALA4 (NAD-dependent malic enzyme OS=Salmonella agona (strain SL483) GN=sfcA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALNS (NAD-dependent malic enzyme OS=Salmonella newport (strain SL254) GN=sfcA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D ++   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALG2 (NAD-dependent malic enzyme OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sfcA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D ++   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALEP (NAD-dependent malic enzyme OS=Salmonella enteritidis PT4 (strain P125109) GN=sfcA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D ++   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SALDC (NAD-dependent malic enzyme OS=Salmonella dublin (strain CT_02021853) GN=sfcA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D ++   Q NNAYIFPG+GLG+I SGA R+ D+M               N  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   + P YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 52/139 (37.41%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W++G A+ A+GSPFDP  + +  +   Q NN+YIFPG+GLG++ SGA RV D+M                   G L PP K+I ++S  IA  VA KA E   A +    K L++  ES  + P Y  Y+
Sbjct:  417 EATPSDIIRWTEGDALIATGSPFDPVIFNEKTYPIAQCNNSYIFPGIGLGVLASGATRVTDEMLMESSRVLAECSPLAQNGNGALLPPLKDIHQVSHCIALAVAKKAVEQNKAPQ-RTEKQLLEKIESYFWKPEYLKYK 554          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_PECCP (NAD-dependent malic enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.625e-18
Identity = 53/139 (38.13%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E   E+   W++G A+ A+GSPF P  Y D VF   Q NN+YIFPG+GLG++ SGA R+ D M               N  +G L P   +I+++S  IA EV  KA +L  A  +     L K  E   + P YR+Y+
Sbjct:  424 EARPEDIIRWTEGAALVATGSPFSPVNYQDKVFPIAQCNNSYIFPGIGLGVLASGAKRITDGMLMAASRALADCSPLANNGEGALLPDLADIQQVSKRIALEV-GKAAQLQGAAVVTSSDALQKAIEHNFWQPQYRSYK 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPA (NAD-dependent malic enzyme OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.477e-18
Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E T ++   W+QG+A+ A+GSPF+P    D  +   Q NN+YIFPG+GLG++ SGA RV D M                  +G L P  ++I K+S HIA  VA  A E G A  LP   +L+ YA E   ++  YR+Y+
Sbjct:  421 EATPKDILHWTQGQALVATGSPFEPVVVDDVTYEIAQCNNSYIFPGIGLGVLASGAKRVSDAMLMASSRALAECSPLAIDGEGSLLPKLEDIHKVSKHIAFAVARTAIEEGHA--LPTTNELLTYAIEDNFWTAEYRSYK 558          
The following BLAST results are available for this feature:
BLAST of FC872661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAO1_SALCH1.539e-1836.69NAD-dependent malic enzyme OS=Salmonella choleraes... [more]
MAO1_SALAR1.539e-1836.69NAD-dependent malic enzyme OS=Salmonella arizonae ... [more]
MAO1_SALA41.539e-1836.69NAD-dependent malic enzyme OS=Salmonella agona (st... [more]
MAO1_SALNS2.010e-1835.97NAD-dependent malic enzyme OS=Salmonella newport (... [more]
MAO1_SALG22.010e-1835.97NAD-dependent malic enzyme OS=Salmonella gallinaru... [more]
MAO1_SALEP2.010e-1835.97NAD-dependent malic enzyme OS=Salmonella enteritid... [more]
MAO1_SALDC2.010e-1835.97NAD-dependent malic enzyme OS=Salmonella dublin (s... [more]
MAO12_PHOPR2.010e-1837.41NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]
MAO1_PECCP2.625e-1838.13NAD-dependent malic enzyme OS=Pectobacterium carot... [more]
MAO1_SHEPA4.477e-1839.29NAD-dependent malic enzyme OS=Shewanella pealeana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872661 ID=FC872661; Name=FC872661; organism=Citrus clementina; type=EST; length=732bp
GGGGTCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAG
CCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAAT
GTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGACTTGG
TTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCATGATGACATGCTTC
TGGCAGCAGCGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGAC
AAGGGACTCCTTTACCCTCCATTTAAGAACATCAAAAAGATTTCAGCTCA
TATTGCTGCAGAGGTAGCTGCAAAAGCATACGAACTTGGTTTGGCAACTC
GCCTCCCTCCGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTAC
AGCCCTGCTTATCGAACCTACCGGTGAAATGGGAGGAATTCAATACAATT
GCTGTTTTGGAGTTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTT
TTTACCTTGGGCTCCTTTTTAAAATGGTACTCCCTCTTCCTCCTTTCTTC
TGTGAAGTCACATAAGTTACCCTGGTGGGTAAGAATCAGCATGGTGGGTA
GTGGTAGGTGCATCTAGCAAAGTAAAAAAATATAGCATGAAAAATGATGT
TGTTGTGGACTTGGAAATTCTACATGAAATGAAATTCAGGTTAACCGTTC
ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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