FC872661

Overview
NameFC872661
Unique NameFC872661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ENT38 (NAD-dependent malic enzyme OS=Enterobacter sp. (strain 638) GN=sfcA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18
Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPFDP  + D V+   Q NN+YIFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I  +S  IA  V   A + G+A +      L +  +   + P YR+YR
Sbjct:  424 EATPQDIIVWTEGNALVATGSPFDPVIWKDKVYPIAQCNNSYIFPGIGLGVIASGASRITDEMLMSASETLAQHSPLVKNGEGLVLPELKDIHIVSRAIAFAVGKMAQQQGVAVKTSADA-LQQAIDENFWMPEYRSYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18
Identity = 49/140 (35.00%), Postives = 76/140 (54.29%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            SE   E+   W++GRA+  +GSPF P EY    +  GQANNA +FPGLGLG I++ +  + D M         G V         + P  ++++ +SA +A EVA  A + G+AT    P+D+++  +  M+ P Y+  R
Sbjct:  428 SEAKPEDLIEWTEGRALITTGSPFPPVEYNGVTYHIGQANNALVFPGLGLGTIVTKSKLITDGMFEACARAIAGMV-NVGVPGAPMLPKVEDLRTVSATVAVEVAKTAMKEGVATE--EPEDIIQAVQDAMWYPVYKPIR 564          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ERWCT (NAD-dependent malic enzyme OS=Erwinia carotovora subsp. atroseptica GN=sfcA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 50/139 (35.97%), Postives = 72/139 (51.80%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E   E+   W++G A+ A+GSPF P  Y D VF   Q NN+YIFPG+GLG++ SGA R+ D M               N  +G L P   +I+++S  IA +V   A   G+A  +     L K  +   + P YR+Y+
Sbjct:  424 EARPEDIIRWTEGSALVATGSPFSPVHYQDKVFPIAQCNNSYIFPGIGLGVLASGANRITDGMLMAASRALADCSPLANNGEGALLPDLSDIQQVSKRIALDVGKAAQLQGVAV-VTSADALQKAIDHNFWQPQYRSYK 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHEHH (NAD-dependent malic enzyme OS=Shewanella halifaxensis (strain HAW-EB4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 54/140 (38.57%), Postives = 76/140 (54.29%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E T ++   W+QG+A+ A+GSPF+P    D  +   Q NN+YIFPG+GLG++ SGA RV D M                  +G L P  ++I  +S  IA  VA  A E G A  LP  K+L+ YA E   ++  YR+Y+
Sbjct:  421 EATPKDILHWTQGKALVATGSPFEPVVIDDTTYEIAQCNNSYIFPGIGLGVLASGAKRVSDAMLMASSRALAECSPLAIDGEGSLLPKLEDIHLVSKRIAFAVARVAIEEGHA--LPTTKELLTYAIEDNFWTAEYRSYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHEDO (NAD-dependent malic enzyme OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sfcA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 53/140 (37.86%), Postives = 73/140 (52.14%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLV-KYAESCMYSPAYRTYR 424
            E T E+   W+ G+A+ A+GSPF+P   GD  F   Q NN++IFPG+GLG++   A RV D+M                   G L P   +I+K+S +IA  VA  A   GLA  LP   +L+ K  E   + P YR Y+
Sbjct:  421 EATPEDVLNWTNGQALVATGSPFEPVTIGDETFEIAQCNNSFIFPGIGLGVLACRAKRVSDEMLMASSRALAECSPLGTTRTGSLLPKLDDIQKVSKYIAFAVAKVAMAQGLA--LPLTDELLNKSIEKNFWEPKYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 54/140 (38.57%), Postives = 74/140 (52.86%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKD-LVKYAESCMYSPAYRTYR 424
            E T ++  TWS G+AI A+GSPF P  Y +      Q NN+YIFPG+GLG++ + A  + D+M             Q    KG L PP   I+ IS  IA  VA +A   GLA  LP  ++ + +      ++P YRTYR
Sbjct:  419 EATPKDITTWSHGQAIVATGSPFPPTLYENEYIEVSQCNNSYIFPGIGLGVLAARATAISDNMLMAASQALADASMQYEKVKGALLPPLGEIRPISKSIAYAVAKQAIADGLA--LPVSEETMQRRLVDNFWAPKYRTYR 556          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHISS (NAD-dependent malic enzyme OS=Shigella sonnei (strain Ss046) GN=sfcA PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHIFL (NAD-dependent malic enzyme OS=Shigella flexneri GN=sfcA PE=3 SV=4)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHIF8 (NAD-dependent malic enzyme OS=Shigella flexneri serotype 5b (strain 8401) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHIBS (NAD-dependent malic enzyme OS=Shigella boydii serotype 4 (strain Sb227) GN=sfcA PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
The following BLAST results are available for this feature:
BLAST of FC872661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAO1_ENT387.637e-1835.97NAD-dependent malic enzyme OS=Enterobacter sp. (st... [more]
MAO3_BACSU9.974e-1835.00Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAO1_ERWCT1.303e-1735.97NAD-dependent malic enzyme OS=Erwinia carotovora s... [more]
MAO1_SHEHH2.902e-1738.57NAD-dependent malic enzyme OS=Shewanella halifaxen... [more]
MAO1_SHEDO3.790e-1737.86NAD-dependent malic enzyme OS=Shewanella denitrifi... [more]
MAO1_PSYIN3.790e-1738.57NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
MAO1_SHISS6.465e-1734.53NAD-dependent malic enzyme OS=Shigella sonnei (str... [more]
MAO1_SHIFL6.465e-1734.53NAD-dependent malic enzyme OS=Shigella flexneri GN... [more]
MAO1_SHIF86.465e-1734.53NAD-dependent malic enzyme OS=Shigella flexneri se... [more]
MAO1_SHIBS6.465e-1734.53NAD-dependent malic enzyme OS=Shigella boydii sero... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872661 ID=FC872661; Name=FC872661; organism=Citrus clementina; type=EST; length=732bp
GGGGTCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAG
CCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAAT
GTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGACTTGG
TTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCATGATGACATGCTTC
TGGCAGCAGCGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGAC
AAGGGACTCCTTTACCCTCCATTTAAGAACATCAAAAAGATTTCAGCTCA
TATTGCTGCAGAGGTAGCTGCAAAAGCATACGAACTTGGTTTGGCAACTC
GCCTCCCTCCGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTAC
AGCCCTGCTTATCGAACCTACCGGTGAAATGGGAGGAATTCAATACAATT
GCTGTTTTGGAGTTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTT
TTTACCTTGGGCTCCTTTTTAAAATGGTACTCCCTCTTCCTCCTTTCTTC
TGTGAAGTCACATAAGTTACCCTGGTGGGTAAGAATCAGCATGGTGGGTA
GTGGTAGGTGCATCTAGCAAAGTAAAAAAATATAGCATGAAAAATGATGT
TGTTGTGGACTTGGAAATTCTACATGAAATGAAATTCAGGTTAACCGTTC
ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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