FC872661

Overview
NameFC872661
Unique NameFC872661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHIB3 (NAD-dependent malic enzyme OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ESCF3 (NAD-dependent malic enzyme OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_EDWI9 (NAD-dependent malic enzyme OS=Edwardsiella ictaluri (strain 93-146) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 2 
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E   E+   W+ G A+ ASGSPF+P  Y    +   Q NNAYIFPG+GLG++ SGA RV D M                   G L P  K+I+++S  IA +VA  A   G+A +    + L++  E   + P YR+Y+
Sbjct:  424 EARPEDIINWTDGAALVASGSPFEPVLYQGERYPIAQCNNAYIFPGIGLGVLASGARRVTDGMLMAASRALADSSPLARDGHGSLLPDLKDIQQVSRDIAFQVAKAAQRQGVAVQ-TSDEALLQAIEHNFWLPIYRSYK 561
[Close]
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECOSM (NAD-dependent malic enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLU (NAD-dependent malic enzyme OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECO8A (NAD-dependent malic enzyme OS=Escherichia coli O8 (strain IAI1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECO81 (NAD-dependent malic enzyme OS=Escherichia coli O81 (strain ED1a) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECO5E (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECO57 (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 GN=sfcA PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECO55 (NAD-dependent malic enzyme OS=Escherichia coli (strain 55989 / EAEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
The following BLAST results are available for this feature:
BLAST of FC872661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAO1_SHIB36.465e-1734.53NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_ESCF36.465e-1734.53NAD-dependent malic enzyme OS=Escherichia ferguson... [more]
MAO1_EDWI96.465e-1736.69NAD-dependent malic enzyme OS=Edwardsiella ictalur... [more]
MAO1_ECOSM6.465e-1734.53NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLU6.465e-1734.53NAD-dependent malic enzyme OS=Escherichia coli O17... [more]
MAO1_ECO8A6.465e-1734.53NAD-dependent malic enzyme OS=Escherichia coli O8 ... [more]
MAO1_ECO816.465e-1734.53NAD-dependent malic enzyme OS=Escherichia coli O81... [more]
MAO1_ECO5E6.465e-1734.53NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO576.465e-1734.53NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO556.465e-1734.53NAD-dependent malic enzyme OS=Escherichia coli (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872661 ID=FC872661; Name=FC872661; organism=Citrus clementina; type=EST; length=732bp
GGGGTCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAG
CCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAAT
GTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGACTTGG
TTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCATGATGACATGCTTC
TGGCAGCAGCGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGAC
AAGGGACTCCTTTACCCTCCATTTAAGAACATCAAAAAGATTTCAGCTCA
TATTGCTGCAGAGGTAGCTGCAAAAGCATACGAACTTGGTTTGGCAACTC
GCCTCCCTCCGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTAC
AGCCCTGCTTATCGAACCTACCGGTGAAATGGGAGGAATTCAATACAATT
GCTGTTTTGGAGTTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTT
TTTACCTTGGGCTCCTTTTTAAAATGGTACTCCCTCTTCCTCCTTTCTTC
TGTGAAGTCACATAAGTTACCCTGGTGGGTAAGAATCAGCATGGTGGGTA
GTGGTAGGTGCATCTAGCAAAGTAAAAAAATATAGCATGAAAAATGATGT
TGTTGTGGACTTGGAAATTCTACATGAAATGAAATTCAGGTTAACCGTTC
ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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