FC872661

Overview
NameFC872661
Unique NameFC872661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLC (NAD-dependent malic enzyme OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +G++ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECOHS (NAD-dependent malic enzyme OS=Escherichia coli O9:H4 (strain HS) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +G++ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECODH (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / DH10B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +G++ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ECOBW (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / BW2952) GN=sfcA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M                  +G++ P  K+I+K+S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 51/140 (36.43%), Postives = 76/140 (54.29%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E T ++   W++G+A+ A+GSPF+P    D  F   Q NN+YIFPG+GLG++ +GA RV ++M                  +G L PP + I K+S HIA  V   A E G A  LP   +L++ + E   ++  YR Y+
Sbjct:  421 EATPKDLLHWTKGQALVATGSPFEPVVVEDETFEIAQCNNSYIFPGIGLGVLAAGAKRVSNEMLMASSRALAECSPLALDGEGPLLPPLEEIHKVSKHIALAVGKVAIEQGHA--LPCTDELLEQSIEDNFWTAEYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T ++   W++G A+ A+GSPF P  + D ++   Q NNAYIFPG+GLG+I SGA R+ D+M                  +GL+ P  K+I+ +S  IA  V   A + G+A +    + L +  +   +   YR YR
Sbjct:  424 EATPQDIIAWTEGNALVATGSPFAPVAWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKYSPLVLNGEGLVLPELKDIQTVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDENFWQAEYRDYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.457e-16
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGD-NVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLA----------TRLPPPKDLVKYAESCMYSPAYRT 418
            +ECT EEA++      IFASGSPF   + G+ +V    QANN ++FPG+GLG ++SG+  V D M           +T+E   KG++YP    I+ I+  +AA V  +A E  LA           R      + ++ E+ M+SP Y T
Sbjct:  472 AECTPEEAFSILGENIIFASGSPFKDVDLGNGHVGHCNQANNMFLFPGIGLGTLLSGSRIVSDGMLQAAAECLAAYITEEEVLKGIIYPSISRIRDITKEVAAAVVKEAIEEDLAEGYREMDSRELRKLDEAQISEFVENNMWSPDYPT 620          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_VIBF1 (NAD-dependent malic enzyme OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sfcA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.457e-16
Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W+ G+A+ A+GSPFDP  +    +   Q NN++IFPG+GLG++   A RV D+M                   G L PP + I  +S  IA  VA KA E G A  +   + L +  ES  + P YR Y+
Sbjct:  421 EATPNDIIRWTDGQALVATGSPFDPVAHNGQTYPIAQCNNSFIFPGIGLGVLAIKATRVTDEMLMESSRALAECSPLAIHGTGALLPPLEEIHSVSKRIAFAVAKKAIEQGHALEI-TDEALQQKIESYFWKPVYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.457e-16
Identity = 51/140 (36.43%), Postives = 75/140 (53.57%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E T ++   W+ G+A+ A+GSPF+P       F   Q NN+YIFPG+GLG++ +GA RV D+M                  +G L PP + I ++S HIA  VA  A E G A  LP   +L+  + E+  ++  YR Y+
Sbjct:  421 EATPKDVLHWTNGQALVATGSPFEPVALNGETFEIAQCNNSYIFPGIGLGVLSAGAKRVSDEMLMASSRALAECSPLALNGEGPLLPPLEEIHQVSKHIAFAVAKVAVEQGHA--LPCTDELLAQSIENNFWTAEYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_ALISL (NAD-dependent malic enzyme OS=Aliivibrio salmonicida (strain LFI1238) GN=sfcA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.208e-16
Identity = 48/139 (34.53%), Postives = 69/139 (49.64%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W+ G+A+ A+GSPFDP  +    +   Q NN++IFPG+GLG++   A RV D+M                   G L PP + I  +S  IA  VA KA E G A  +   + L++  E   + P YR Y+
Sbjct:  421 EATPNDIIRWTDGQALVATGSPFDPVTHNGQTYPIAQCNNSFIFPGIGLGVLAIKATRVSDEMLRESSRALSECSPLAINGSGALLPPLEEIHTVSKKIAFAVAKKAIEQGYALEI-TDEALMQKIEQYFWKPVYRRYK 558          
The following BLAST results are available for this feature:
BLAST of FC872661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAO1_ECOLC1.103e-1633.81NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOHS1.103e-1633.81NAD-dependent malic enzyme OS=Escherichia coli O9:... [more]
MAO1_ECODH1.103e-1633.81NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOBW1.103e-1633.81NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_SHESH1.881e-1636.43NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_CITK81.881e-1634.53NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]
MAOM_SOLTU2.457e-1635.57NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAO1_VIBF12.457e-1635.25NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_SHEWM2.457e-1636.43NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]
MAO1_ALISL3.208e-1634.53NAD-dependent malic enzyme OS=Aliivibrio salmonici... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872661 ID=FC872661; Name=FC872661; organism=Citrus clementina; type=EST; length=732bp
GGGGTCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAG
CCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAAT
GTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGACTTGG
TTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCATGATGACATGCTTC
TGGCAGCAGCGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGAC
AAGGGACTCCTTTACCCTCCATTTAAGAACATCAAAAAGATTTCAGCTCA
TATTGCTGCAGAGGTAGCTGCAAAAGCATACGAACTTGGTTTGGCAACTC
GCCTCCCTCCGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTAC
AGCCCTGCTTATCGAACCTACCGGTGAAATGGGAGGAATTCAATACAATT
GCTGTTTTGGAGTTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTT
TTTACCTTGGGCTCCTTTTTAAAATGGTACTCCCTCTTCCTCCTTTCTTC
TGTGAAGTCACATAAGTTACCCTGGTGGGTAAGAATCAGCATGGTGGGTA
GTGGTAGGTGCATCTAGCAAAGTAAAAAAATATAGCATGAAAAATGATGT
TGTTGTGGACTTGGAAATTCTACATGAAATGAAATTCAGGTTAACCGTTC
ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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