FC872661

Overview
NameFC872661
Unique NameFC872661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_VIBFM (NAD-dependent malic enzyme OS=Vibrio fischeri (strain MJ11) GN=sfcA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.190e-16
Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W+ G+A+ A+GSPFDP  +    +   Q NN++IFPG+GLG++   A RV D+M                   G L PP + I  +S  IA  VA KA E G A  +   + L +  ES  + P YR Y+
Sbjct:  421 EATPNDIIRWTNGQALVATGSPFDPVSHNGQTYPIAQCNNSFIFPGIGLGVLAIKATRVTDEMLMESSRALAECSPLAINGTGALLPPLEEIHSVSKRIAFAVAKKAIEQGHALEI-TDEALHQKIESYFWKPVYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPW (NAD-dependent malic enzyme OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=sfcA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.190e-16
Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYA-ESCMYSPAYRTYR 424
            E T ++   W++G+A+ A+GSPF+P    D  +   Q NN+YIFPG+GLG++ +GA RV D M                  +G L P  ++I K+S HIA  VA  A E G A  LP   +L+  A E   ++  YR Y+
Sbjct:  421 EATPKDILHWTKGQALVATGSPFEPVVVDDITYEIAQCNNSYIFPGIGLGVLAAGAERVSDAMLMASSRALAECSPLSINGEGSLLPQLEDIHKVSKHIAFAVAKVAIEEGHA--LPTSDELLSQAIEDNFWTAEYRRYK 558          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_PHOLL (NAD-dependent malic enzyme OS=Photorhabdus luminescens subsp. laumondii GN=sfcA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.190e-16
Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E   E+   W+ G A+ A+GSPF+P +Y D  +   Q NNAYIFPG+GLG+I SGA  V D M                  +G L P   +I+++S  IA +VA +A   G+AT +     L +  E   + P YR Y+
Sbjct:  424 EARPEDIINWTDGAALVATGSPFNPVKYKDQEYPIAQCNNAYIFPGIGLGVIASGAKLVTDGMLMAASRTLANCSPLAQEGQGPLLPLIDDIQEVSRKIAKQVAKEAQIQGVAT-VTSDGALDEAIERNFWKPEYRVYK 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_YERE8 (NAD-dependent malic enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=sfcA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.473e-16
Identity = 49/139 (35.25%), Postives = 70/139 (50.36%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E   E+   W+ G A+ A+GSPF P  Y + ++   Q NN+YIFPG+GLG++ SGA RV D M                  +G L P   +I+ +S  IA +V   A   G+A  +   + L K  E   + P YRTY+
Sbjct:  424 EARPEDIINWTDGAALVATGSPFSPVSYKEKLYPIAQCNNSYIFPGIGLGVLASGAKRVTDGMLMAASRALAQCSPLAQNGEGALLPNIDDIQAVSKTIAMQVGKAAQLQGVAI-VTSEEALAKAIEHNYWQPQYRTYK 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_AERHH (NAD-dependent malic enzyme OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sfcA PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.473e-16
Identity = 50/139 (35.97%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W+ G+A+ A+GSPF P EY    +V  Q NN++IFPG+GLG+I +GA RV D M                 ++G L P   +I ++S +IA  VA  A   G A +  P + + +  E+  + P YR YR
Sbjct:  423 EATPADLIRWTDGQALVATGSPFAPVEYKGKRYVIAQCNNSFIFPGIGLGVIAAGATRVTDAMLMSASRALAECSPLVKGEEGSLLPDLADIHQVSRYIAKMVAKTAMLQGKAVQ-TPDEVIDQSIEANFWRPEYRRYR 560          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP7 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sfcA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.148e-16
Identity = 49/139 (35.25%), Postives = 70/139 (50.36%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T +   +W+ G A+ A+GSPF P       +   Q NN+YIFPG+GLG+I SGA RV D+M               N  +G + P  K+I+ +S  IA  V   A E G+A +    + L++      + P YR YR
Sbjct:  424 EATPQNILSWTDGEALVATGSPFSPVTVKGKQYPIAQCNNSYIFPGIGLGVIASGASRVTDEMLMAASETLAQHSPLVNNGEGPVLPELKDIQTVSRAIAFAVGKVAQEQGVAVK-TSAEALLQAISDNFWLPEYRNYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP3 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae (strain 342) GN=sfcA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.148e-16
Identity = 49/139 (35.25%), Postives = 70/139 (50.36%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T +   +W+ G A+ A+GSPF P       +   Q NN+YIFPG+GLG+I SGA RV D+M               N  +G + P  K+I+ +S  IA  V   A E G+A +    + L++      + P YR YR
Sbjct:  424 EATPQNILSWTDGEALVATGSPFAPVTLKGKQYAIAQCNNSYIFPGIGLGVIASGASRVTDEMLMAASETLAKHSPLVNNGEGPVLPELKDIQTVSRAIAFAVGKVAQEQGVAVK-TSAEALLQAISDNFWLPEYRNYR 561          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_AERS4 (NAD-dependent malic enzyme OS=Aeromonas salmonicida (strain A449) GN=sfcA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.148e-16
Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T  +   W+ G+A+ A+GSPF P EY    +V  Q NN++IFPG+GLG+I SGA RV D M                  +G L P   +I ++S +IA  VA  A   G A +  P + + +  E+  + P YR YR
Sbjct:  423 EATPADLIRWTDGQALVATGSPFAPVEYKGKRYVIAQCNNSFIFPGIGLGVIASGATRVTDAMLMSASRALAECSPLVKGAEGSLLPDLADIHQVSRYIAKMVAKTAMLQGKAVQ-TPDEVIDQAIEANFWRPEYRRYR 560          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 48/149 (32.21%), Postives = 77/149 (51.68%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDN-VFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLA----------TRLPPPKDLVKYAESCMYSPAYRT 418
            +ECT EEA++      ++ASGSPF   + G+  +    Q NN Y+FPG+GLG+++SG+  + D M         G +T E    G++YP    I+ I+  +AA V  +A E  LA           +    + +++Y E  M++P Y T
Sbjct:  469 AECTPEEAFSIVGDHVVYASGSPFKDVDLGNGKIGHVNQGNNMYLFPGIGLGVLLSGSRIISDSMFQAAAERLAGYMTDEEVINGVIYPSISRIRDITKEVAAAVIKEAVEEDLAEGYRDMDARELQKLNEEQILEYIEKNMWNPEYPT 617          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA7 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain PA7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 50/139 (35.97%), Postives = 71/139 (51.08%), Query Frame = 2
Query:    8 ECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            E T +E   W+ G+A+ A+GSPF P + GD      Q NNAYIFPG+GLG+I + A RV D M                  +G + P   +I+++S  IA  VA +A   G A +    + L +  E+  + P YR YR
Sbjct:  423 EATPQEILNWTDGQALVATGSPFQPVQVGDRRMPIAQCNNAYIFPGIGLGVIAARATRVTDGMLMAAANALANCSPIVTRGEGAVLPALGDIREVSKRIAVAVAKQAQAEGKALQ-TSDEVLNEAIEANFWFPRYRAYR 560          
The following BLAST results are available for this feature:
BLAST of FC872661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAO1_VIBFM4.190e-1635.25NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_SHEPW4.190e-1637.14NAD-dependent malic enzyme OS=Shewanella piezotole... [more]
MAO1_PHOLL4.190e-1636.69NAD-dependent malic enzyme OS=Photorhabdus lumines... [more]
MAO1_YERE85.473e-1635.25NAD-dependent malic enzyme OS=Yersinia enterocolit... [more]
MAO1_AERHH5.473e-1635.97NAD-dependent malic enzyme OS=Aeromonas hydrophila... [more]
MAO1_KLEP77.148e-1635.25NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_KLEP37.148e-1635.25NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_AERS47.148e-1636.69NAD-dependent malic enzyme OS=Aeromonas salmonicid... [more]
MAOM_AMAHP9.335e-1632.21NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAO1_PSEA79.335e-1635.97NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872661 ID=FC872661; Name=FC872661; organism=Citrus clementina; type=EST; length=732bp
GGGGTCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAG
CCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAAT
GTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGACTTGG
TTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCATGATGACATGCTTC
TGGCAGCAGCGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGAC
AAGGGACTCCTTTACCCTCCATTTAAGAACATCAAAAAGATTTCAGCTCA
TATTGCTGCAGAGGTAGCTGCAAAAGCATACGAACTTGGTTTGGCAACTC
GCCTCCCTCCGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTAC
AGCCCTGCTTATCGAACCTACCGGTGAAATGGGAGGAATTCAATACAATT
GCTGTTTTGGAGTTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTT
TTTACCTTGGGCTCCTTTTTAAAATGGTACTCCCTCTTCCTCCTTTCTTC
TGTGAAGTCACATAAGTTACCCTGGTGGGTAAGAATCAGCATGGTGGGTA
GTGGTAGGTGCATCTAGCAAAGTAAAAAAATATAGCATGAAAAATGATGT
TGTTGTGGACTTGGAAATTCTACATGAAATGAAATTCAGGTTAACCGTTC
ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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