FC872663

Overview
NameFC872663
Unique NameFC872663
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length529
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.586e-17
Identity = 59/166 (35.54%), Postives = 85/166 (51.20%), Query Frame = 3
Query:   54 AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPME-NFKS*VLKEPIGVVGLI 524
            A+P P+ Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AAR A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D V  C  YYA  A+    K     ++P++ +F S    EP+GV G I
Sbjct:   26 AVPAPNHQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAARAAF--QLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK-----TIPIDGDFFSYTRHEPVGVCGQI 184          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.676e-16
Identity = 57/166 (34.34%), Postives = 85/166 (51.20%), Query Frame = 3
Query:   54 AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPME-NFKS*VLKEPIGVVGLI 524
            A+P P++Q       +FIN EW + V KK  P VNP+T +++  +      DV+ AV AAR A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D V  C  YYA  A+    K     ++P++ ++ S    EP+GV G I
Sbjct:   27 AVPTPNQQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAF--QLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGK-----TIPIDGDYFSYTRHEPVGVCGQI 185          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.420e-15
Identity = 56/158 (35.44%), Postives = 80/158 (50.63%), Query Frame = 3
Query:   57 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPME-NFKS*VLKEPIGVVGLI 524
            I I   +LFIN EW E V  K  P+ NP TEE + ++  A  EDV+ AV AAR+A     G  W +   + R + +  +A  I   +  LA LE+I+ GK    A + D+D       Y A  A+ +  +     ++P++  F S    EPIGV GLI
Sbjct:   16 IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAF--QMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGR-----TIPVDGEFFSYTRHEPIGVCGLI 166          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_KLEP3 (Betaine aldehyde dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.197e-15
Identity = 53/149 (35.57%), Postives = 79/149 (53.02%), Query Frame = 3
Query:   72 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGVV 515
            +QL+ING +      +    +NP T E++  + AA  EDV+ AV++A++       K W++ +   R++ LR     + +R  ELA LET+D GKPL E A  DI   A   EYYA L   L+  Q   + L   +F     +EP+GVV
Sbjct:    7 QQLYINGGYTSATSGRTFETINPATGEVLATVQAAGREDVDRAVESAQRGQ-----KIWAAMTAMERSRILRRAVDLLRQRNDELARLETLDTGKPLSETAAVDIVTGADVLEYYAGLIPALEGSQ---IPLRDSSFVY-TRREPLGVV 146          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.569e-14
Identity = 52/152 (34.21%), Postives = 77/152 (50.66%), Query Frame = 3
Query:   63 IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLK-EPIGV 512
            IP  QLFI+ +W + V KK  P V+P T E++G +      DV+LA  AAR A     G  W       R   L  +A  +      LA+LE++D GKP +E+ V D+D+V   + Y+A  A+    K     ++PM+       + EP+GV
Sbjct:   28 IPDNQLFISNKWHDAVSKKTFPTVSPATGEVIGHVAEGDWADVDLAAKAARAAF--RLGSPWRWMDALKRGWLLNHLADLVERDCVYLASLESLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGK-----TIPMDGEHFCFTRHEPVGV 172          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.049e-14
Identity = 53/153 (34.64%), Postives = 81/153 (52.94%), Query Frame = 3
Query:   63 IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPM-ENFKS*VLKEPIGVV 515
            +P +QL+I+G+  +    K    VNP T E++ ++  A+  DVE AV +A +       K W++ +   R++ LR     + ER  ELA+LET+D GK L E    DI   A   EYYA LA  ++      + LP+ E+      +EP+GVV
Sbjct:    4 LPVQQLYIHGQRVDATSGKTFKTVNPATGEVIAEVQVASQADVERAVQSASEG-----QKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEG-----IQLPLRESSFFYTRREPLGVV 146          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.049e-14
Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = 3
Query:   66 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGVV 515
            P +QL+I+G + +    +    +NP   E++ ++  A A D+E AV++A Q       + W++ +G  RA+ +R     + ER  ELA LET+D GKPL E    DI   A   EYYA LA  ++ +Q   + L   +F     +EP+GVV
Sbjct:    5 PRQQLYIHGAYVDASSNQTFESINPANGEVLAEVAEAGAADLERAVESAEQGQ-----RIWAALTGIERARIMRRAVDLLRERNDELALLETLDTGKPLSETRSVDIITGADVLEYYAGLAPAIEGEQ---IPLRDSSFVY-TRREPLGVV 146          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.564e-14
Identity = 54/158 (34.18%), Postives = 79/158 (50.00%), Query Frame = 3
Query:   57 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPME-NFKS*VLKEPIGVVGLI 524
            I I   +LFIN EW + V  K  P+ NP TEE + ++  A  EDV+ AV AAR+A     G  W +   + R + +  +A  I   +  LA LE+I+ GK    A + D+D       Y A  A+ +  +     ++P++  F S    EPIGV G I
Sbjct:   16 IKIQHTKLFINNEWHDSVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAF--QMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKIFASAYLMDLDYCIKVLRYCAGWADKIQGR-----TIPVDGEFFSYTRHEPIGVCGQI 166          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.961e-14
Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 3
Query:   63 IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPM-ENFKS*VLKEPIGVV 515
            +P +QL+I+G+  +    K    VNP T +++ ++  A+  DVE AV +A +       K W++ +   R++ LR     + ER  ELA+LET+D GK L E    DI   A   EYYA LA  ++      + LP+ E+      +EP+GVV
Sbjct:    4 LPVQQLYIHGQRVDATSGKTFRTVNPATGDVIAEVQVASQADVERAVQSAAEG-----QKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEG-----IQLPLRESSFFYTRREPLGVV 146          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.785e-14
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 3
Query:   54 AIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPME-NFKS*VLKEPIGVVGLI 524
            ++ +   QL ING + +    K  P ++P T E++  +    AED+  AV AAR A        W   S   R++ L   A  + +   ELA+LET D GKP ++++  +I   A  F YYA  A+ +       +++P + N++   L EPIGV G I
Sbjct:   52 SVQVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEG---PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHG-----LTIPADGNYQVHTLHEPIGVAGQI 202          
The following BLAST results are available for this feature:
BLAST of FC872663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
ALDH2_MOUSE2.586e-1735.54Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
ALDH2_BOVIN1.676e-1634.34Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
ALDH1_ELEED2.420e-1535.44Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
BETB_KLEP39.197e-1535.57Betaine aldehyde dehydrogenase OS=Klebsiella pneum... [more]
AL1B1_BOVIN1.569e-1434.21Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
BETB_STRMK2.049e-1434.64Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
BETB_PSEU52.049e-1434.44Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]
ALDH1_MACPR4.564e-1434.18Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
BETB_STRM55.961e-1433.99Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
AL2B4_ARATH7.785e-1432.08Aldehyde dehydrogenase family 2 member B4, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG07ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872663 ID=FC872663; Name=FC872663; organism=Citrus clementina; type=EST; length=529bp
GGGGAAAAAAAAATAAAAGTAAAAAAACCGAGAGAAAAGGAAAAATGGCG
ATGGCGATCCCAATCCCAAGTCGTCAGCTGTTCATCAACGGTGAATGGAG
AGAGCCCGTTCTCAAGAAACGCATCCCAATCGTTAATCCCACCACTGAAG
AGATCGTCGGTGATATTCCAGCAGCTACCGCTGAAGATGTTGAGCTGGCT
GTGGATGCCGCCCGTCAAGCACTTTCTAGAAACAGAGGGAAGGATTGGTC
CTCTGCATCCGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTA
AGATAACAGAGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGT
GGGAAGCCACTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTG
TTTCGAGTACTATGCAGACCTTGCTGAAGGCTTAGATGCCAAACAAAAGG
CTCCTGTTTCTCTTCCTATGGAGAATTTCAAGAGTTAAGTACTTAAGGAA
CCCATTGGGGTTGTTGGATTGATTACTCC
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