FC872701
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_NEIMB (Cysteine synthase OS=Neisseria meningitidis serogroup B GN=cysK PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.177e-20 Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 265 GIGAG IP VL+ + D + VS+E A ET++ +A KEG+LVGISSG +++AK+PEN GKLIVV+ PS GERYLST LF + Sbjct: 223 GIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSALQLAKQPENEGKLIVVLLPSYGERYLSTPLFADL 309
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_HAEIN (Cysteine synthase OS=Haemophilus influenzae GN=cysK PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 51/87 (58.62%), Postives = 62/87 (71.26%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 265 GIGAG IP LD++++D V TV S+ A+ T++ L +EG+L GISSG R+AK PE A KLIVVI PSA ERYLSTALFE I Sbjct: 228 GIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLAKLPEFADKLIVVILPSASERYLSTALFEGI 314
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: SRPG_SYNE7 (Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpG PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18 Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHE 274 GIGAG IP LD++++D+V VS+EEAI ++ LA +EGL+ GIS G +R+A++ E+AGK IVV+ P +GERYLSTALF+ I +E Sbjct: 234 GIGAGFIPENLDLSLVDQVERVSNEEAIAYARRLAQEEGLISGISCGAAVAAAVRLAQQSEHAGKTIVVVLPDSGERYLSTALFDGIFNE 323
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAI (Cysteine synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysK PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 48/87 (55.17%), Postives = 62/87 (71.26%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 265 GIG G IP LD+ ++D+VITVSSEEAI T+K L KEG+L GISSG I++ ++ + + K IVVI PS+GERYLST LF + Sbjct: 229 GIGPGFIPKNLDLTIIDQVITVSSEEAILTAKELMKKEGILAGISSGAALYAAIKIQQQKKFSDKKIVVILPSSGERYLSTELFSEL 315
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAP (Cysteine synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysK PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17 Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALF 256 GIGAG IP LD++++D +ITVSSEEAI +K + KEG+L GISSG +++ K + K IVVI PS+GERYLST LF Sbjct: 229 GIGAGFIPKNLDLSLIDRIITVSSEEAIFNAKKIMKKEGILSGISSGAAIAAALKIQKENDFKNKNIVVILPSSGERYLSTELF 312
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16 Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVE 280 GIGAG IP LD+ ++D+VI +++EEAI T++ L +EG+L GISSG +++ + K IVVI PS+GERYLSTALF + E E Sbjct: 229 GIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16 Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVE 280 GIGAG IP LD+ ++D+VI +++EEAI T++ L +EG+L GISSG +++ + K IVVI PS+GERYLSTALF + E E Sbjct: 229 GIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15 Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVE 280 GIGAG IP LD+ ++D+V+ +++EEAI T++ L +EG+L GISSG +++ + K IVVI PS+GERYLSTALF + E E Sbjct: 229 GIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15 Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVE 280 GIGAG IP LD+ ++D+V+ +++EEAI T++ L +EG+L GISSG +++ + K IVVI PS+GERYLSTALF + E E Sbjct: 229 GIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_STRP6 (Cysteine synthase OS=Streptococcus pyogenes serotype M6 GN=cysK PE=1 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFE 259 GI AG IP LD D++I V S++A+ET++L KEG LVGISSG I VAK+ GK ++ I P GERYLST L++ Sbjct: 223 GISAGFIPNTLDTKAYDQIIRVKSKDALETARLTGAKEGFLVGISSGAALYAAIEVAKQ-LGKGKHVLTILPDNGERYLSTELYD 306 The following BLAST results are available for this feature:
BLAST of FC872701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872701 ID=FC872701; Name=FC872701; organism=Citrus clementina; type=EST; length=680bpback to top |