FC872775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: YPT5_SCHPO (GTP-binding protein ypt5 OS=Schizosaccharomyces pombe GN=ypt5 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.860e-45 Identity = 92/175 (52.57%), Postives = 118/175 (67.43%), Query Frame = 3 Query: 234 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADL-HEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 755 N + + KLVLLGDS VGKS +VLRFV+ QFD + T+GA+FL+QT+ + ++T+VK EIWDTAGQERY +LAP+YYR YDIT S KA+ W+KELQ+ IV+AL GNK DL E+R V D YA + + F ETSAKTA+N+N+LF IAK+LP Sbjct: 4 NTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLP 178
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RB22A_HUMAN (Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 5.940e-43 Identity = 87/163 (53.37%), Postives = 116/163 (71.17%), Query Frame = 3 Query: 267 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 755 +K+ LLGD+GVGKS IV RFV FDP T+GASF+++T+ Q+ KF IWDTAGQER+ ALAP+YYRG YDIT ++F+ + WVKEL++HG P+IV+A+ GNK DL + REV +D +YA+ F+ETSAK A NIN+LF EI++R+P Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELH-KFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 167
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RB22A_MOUSE (Ras-related protein Rab-22A OS=Mus musculus GN=Rab22a PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 1.323e-42 Identity = 86/163 (52.76%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 267 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 755 +K+ LLGD+GVGKS IV RFV FDP T+GASF+++T+ Q+ KF IWDTAGQER+ ALAP+YYRG YDIT ++F+ + WV+EL++HG P IV+A+ GNK DL + REV +D +YA+ F+ETSAK A NIN+LF EI++R+P Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELH-KFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 167
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: VPS21_YEAST (Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae GN=VPS21 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.728e-42 Identity = 85/166 (51.20%), Postives = 119/166 (71.69%), Query Frame = 3 Query: 267 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHE---KREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 755 +KLVLLG++ VGKS IVLRFV F + T+GA+FL+Q + + + T VKFEIWDTAGQER+A+LAP+YYR YD+T P SF KA++WVKEL + S DI++ALVGNK D+ + +R+V ++G + AE+ G+ F ETSAKT +N+N +F I +++P Sbjct: 8 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHT-VKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 172
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RB22A_CANFA (Ras-related protein Rab-22A OS=Canis familiaris GN=RAB22A PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.948e-42 Identity = 86/163 (52.76%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 267 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 755 +K+ LLGD+GVGKS IV RFV FDP T+GASF+++T+ Q+ KF IWDTAGQE + ALAP+YYRG YDIT ++F+ + WVKEL++HG P+IV+A+ GNK DL + REV +D +YA+ F+ETSAK A NIN+LF EI++R+P Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELH-KFLIWDTAGQEAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 167
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 5.029e-42 Identity = 87/167 (52.10%), Postives = 115/167 (68.86%), Query Frame = 3 Query: 267 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSP 767 +K+ LLGD+GVGKS IV RFV+ FD T+GASF+++T+ + KF IWDTAGQER+ +LAP+YYRG YDIT DSF+ + WVKEL++HG +IVMA+ GNK DL + REVP +D EYAE G +ETSAK A NI +LF+ I++++P P Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELH-KFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQIPPLDP 171
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB31_MOUSE (Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 5.029e-42 Identity = 87/167 (52.10%), Postives = 115/167 (68.86%), Query Frame = 3 Query: 267 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSP 767 +K+ LLGD+GVGKS IV RFV+ FD T+GASF+++T+ + KF IWDTAGQER+ +LAP+YYRG YDIT DSF+ + WVKEL++HG +IVMA+ GNK DL + REVP +D EYAE G +ETSAK A NI +LF+ I++++P P Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELH-KFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLGP 171
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB31_HUMAN (Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.120e-41 Identity = 87/167 (52.10%), Postives = 114/167 (68.26%), Query Frame = 3 Query: 267 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSP 767 +K+ LLGD+GVGKS IV RFV+ FD T+GASF+++T+ + KF IWDTAGQER+ +LAP+YYRG YDIT DSF + WVKEL++HG +IVMA+ GNK DL + REVP +D EYAE G +ETSAK A NI +LF+ I++++P P Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELH-KFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDP 171
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB5B_DICDI (Putative ras-related protein Rab-5B OS=Dictyostelium discoideum GN=rab5B PE=5 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.871e-37 Identity = 87/202 (43.07%), Postives = 121/202 (59.90%), Query Frame = 3 Query: 159 TGRMGCSGSVPARSSGQSGGLNNLENAGSSDAKNL---RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEY-AEKNGMFFIETSAKTADNINQLFEEIAKRL 752 T + GC G ++ + + + + S+D +N KLVLLG+ GK+CI R VR +F PT T+GA+FL +++ + D+ +K EIWDTAGQERY +L P+YYRG YDIT ++F + WV ELQKH SP++++AL GNK DL REV + Y +E F ETSA + NIN+LF EI +RL Sbjct: 11 TAKGGCCGGGGSQDNKANQNSGIVVSNTSTDNRNKFDKGFKLVLLGEMNTGKTCISSRLVRNEFGPTDS-TIGAAFLVKSMVV-DNINIKLEIWDTAGQERYRSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDL-PNREVQVDEVNRYISELGNAIFFETSAASGQNINELFTEICRRL 209
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: YPT53_YEAST (GTP-binding protein YPT53 OS=Saccharomyces cerevisiae GN=YPT53 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 8.308e-37 Identity = 81/177 (45.76%), Postives = 114/177 (64.41%), Query Frame = 3 Query: 261 LRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADL------HEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPSS 773 L +K+VLLG+S VGKS IVLRFV F + + T+GA+FL++ I +D +KFEIWDTAGQER+A LAP+YYR +D+T+ SF KAQ WV+EL + DIV+ALVGNK DL +E R + A E+ + + E SAKT +NI Q+F+ + +++P P ++ Sbjct: 11 LTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRIT-RDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTLGEKVPCPEQNT 186 The following BLAST results are available for this feature:
BLAST of FC872775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872775 ID=FC872775; Name=FC872775; organism=Citrus clementina; type=EST; length=933bpback to top |