FC872775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB6B_HUMAN (Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6B PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.859e-34 Identity = 73/175 (41.71%), Postives = 110/175 (62.86%), Query Frame = 3 Query: 234 NAGSSDAKNLR-VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 755 +AG LR KLV LG+ VGK+ ++ RF+ FD T + T+G FLS+T+ L+D T V+ ++WDTAGQER+ +L P Y R YDIT+ +SF + W+ +++ D+++ LVGNK DL +KR++ ++G + A++ + FIETSAKT N+ QLF +A LP Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALP 175
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB6B_BOVIN (Ras-related protein Rab-6B OS=Bos taurus GN=RAB6B PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.859e-34 Identity = 73/175 (41.71%), Postives = 110/175 (62.86%), Query Frame = 3 Query: 234 NAGSSDAKNLR-VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 755 +AG LR KLV LG+ VGK+ ++ RF+ FD T + T+G FLS+T+ L+D T V+ ++WDTAGQER+ +L P Y R YDIT+ +SF + W+ +++ D+++ LVGNK DL +KR++ ++G + A++ + FIETSAKT N+ QLF +A LP Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALP 175
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.041e-34 Identity = 73/161 (45.34%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 267 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHE-KREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 746 +KL+L+GDSGVGKSC++LRF G F + T+G F +TI L D +K +IWDTAGQER+ + YYRG YD+T SFN + W++ +++H S ++ LVGNKAD+ E KR VP G A++ G+ F ETSAKT N+ ++F IA+ Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEL-DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.041e-34 Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 5.041e-34 Identity = 63/161 (39.13%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D+ +K +IWDTAGQE + ++ YYRG YDIT D+FN W+K+ + + + ++ + L+GNK+D+ KR V ++G ++A++NG+ F+ETSAKTA N+ + F A ++ Sbjct: 7 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKI 166
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.041e-34 Identity = 70/170 (41.18%), Postives = 104/170 (61.18%), Query Frame = 3 Query: 243 SSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 + D + K+VL+GDSGVGKS ++ RF + +F SK T+G F ++++ + D +K +IWDTAGQERY A+ YYRG YD+T +F + W+KEL+ H P+IV+ LVGNK+DL V +D +AEK ++F+ETSA A N+ F E+ ++ Sbjct: 6 ADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKV-IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQI 174
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.583e-34 Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEI 167
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 6.583e-34 Identity = 70/171 (40.94%), Postives = 105/171 (61.40%), Query Frame = 3 Query: 240 GSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 G+ + N K+VL+G+SGVGK+ ++ RF R +F S+ T+G F ++T+ L + VK +IWDTAG ERY A+ YYRG +D+T ++ + W+KEL H IV+ LVGNK+DL + REVP ++ +AE NG+ F+ETSA + N+ FE + K + Sbjct: 4 GTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML-GTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 8.598e-34 Identity = 70/171 (40.94%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 240 GSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 G + N K+VL+G+SGVGK+ ++ RF R +F S+ T+G F ++T+ L + VK +IWDTAG ERY A+ YYRG +D+T ++ + W+KEL H IV+ LVGNK+DL + REVP ++ +AE NG+ F+ETSA + N+ FE + K + Sbjct: 4 GKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLL-GTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
BLAST of FC872775 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 144.436 bits (363), Expect = 8.598e-34 Identity = 72/157 (45.86%), Postives = 100/157 (63.69%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 740 K+VL+GDSGVGKS I+ RF R +F SK T+G F ++T ++ T +K +IWDTAGQERY A+ YYRG YDIT +F+ W++EL+ H +IV+ + GNK+DL+ R V +DG AEK G+ F+ETSA A N+ + F+ I Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT-IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTI 169 The following BLAST results are available for this feature:
BLAST of FC872775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872775 ID=FC872775; Name=FC872775; organism=Citrus clementina; type=EST; length=933bpback to top |