FC872776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.538e-16 Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 +KGC G KKRV+TLR+SLL SR ALE I+LKFIDT+SKFGHGRFQT QEK + G K Sbjct: 333 LKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 1.011e-15 Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 +KGC G KKRV+TLR+SLL SR A+E I+LKFIDT+SKFGHGRFQT QEK + G K Sbjct: 333 LKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.942e-15 Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 188 +KGC GP+KR +TLR+S+ Q R ALE+I LKFIDTSSKFGHG QT ++K KY+G K+ Sbjct: 332 LKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKS 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.018e-15 Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA*F 194 ++G +GPKKR++TLR+SL+ Q R+A E+I LK+IDTSSK GHGRFQTT EK + G+LK F Sbjct: 330 LRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDF 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.018e-15 Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA*F 194 ++G +GPKKR++TLR+SL+ Q R+A E+I LK+IDTSSK GHGRFQTT EK + G+LK F Sbjct: 330 LRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDF 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 76.2554 bits (186), Expect = 5.548e-14 Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 VKGC G +KR+VTLR+SL SR ALEE+ LK+IDT+SKFG GRFQT EK + G LK Sbjct: 324 VKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.236e-13 Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 188 VKG VG +KRVVTLR+SLL+Q A EE+ +KF+DTSSK GHGRFQT+ EK +YG KA Sbjct: 318 VKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKAFYGARKA 376
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.108e-13 Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 VKG G KKRV+TLR++L Q SR A E+++LK+IDTSSKFGHG FQT +EK + G LK Sbjct: 325 VKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.696e-13 Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 VKG G +KRVVTLR+SL SR ALEE+ LK+IDT+SKFG GRFQT EK + G LK Sbjct: 325 VKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFMGTLK 385
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.134e-13 Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 VKG G KKRV+TLR+S+ SR ALE+++LK+IDTSS+FGHG FQT EK ++ G LK Sbjct: 325 VKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQFQGTLK 385 The following BLAST results are available for this feature:
BLAST of FC872776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872776 ID=FC872776; Name=FC872776; organism=Citrus clementina; type=EST; length=413bpback to top |