FC872778

Overview
NameFC872778
Unique NameFC872778
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length858
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872778 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 8.880e-75
Identity = 141/258 (54.65%), Postives = 182/258 (70.54%), Query Frame = 1
Query:  100 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHLTKRPEDI--GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR 858
            +++ + F+SESV EGHPDK+CD +SDAVLD CL+QDP S+VACET  KT M+M+ GEITTKAK+DY+KI RDT R IG+ S D+G DAD C V+ +I +QSPDI  GV    G       ++  GAGDQG MFGYA +ET  FMPL+  LA +L  RLT+VRK+    +LRPDGK+QVTVEY +   A    R+  V+ISTQH   V + +I AD+K++VI  + P   LD  T +++NP+G FV+GGP GD GLTGR
Sbjct:    3 EIKNYYFSSESVTEGHPDKICDAVSDAVLDECLKQDPNSRVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFMPLTIHLAHRLAERLTKVRKDKVVDYLRPDGKSQVTVEYKDGKAA----RIEAVVISTQHAAGVDHKQIEADIKKYVINEICPANMLDSNTKYYINPTGSFVVGGPMGDCGLTGR 256          
BLAST of FC872778 vs. ExPASy Swiss-Prot
Match: METK_LACF3 (S-adenosylmethionine synthetase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=metK PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.515e-74
Identity = 143/257 (55.64%), Postives = 185/257 (71.98%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR 858
            E  LFTSESV+EGHPDK+ DQISDA+LDA LE+DP+++VA ET   T + +VFGEI+T A VD + +VR+T + IG+     G D D+C V+V +++QS DIAQGV   L  R       + IGAGDQG MFG+ATDET E+MPL  +L+ KL  R+  +RK+    +LRPD K +VTVEY  D     PVRV TV++STQHD  V+ ++I AD+KE VIK VIP +YLD++T + +NP+GRFVIGGP GDAGLTGR
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDALLEKDPDARVAVETSVTTGLALVFGEISTSAYVDIQHVVRETIKEIGYTDGKYGFDGDNCAVIVALDEQSKDIAQGVDDSLEIREGQVDPLDQIGAGDQGLMFGFATDETPEYMPLPLILSHKLMRRIAILRKDKVIKYLRPDAKAEVTVEYDADG---KPVRVDTVVLSTQHDPDVSLEQIQADVKEQVIKAVIPAEYLDDQTKYFINPTGRFVIGGPQGDAGLTGR 256          
BLAST of FC872778 vs. ExPASy Swiss-Prot
Match: METK_BACA2 (S-adenosylmethionine synthetase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metK PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.515e-74
Identity = 145/256 (56.64%), Postives = 178/256 (69.53%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR 858
            LFTSESV EGHPDK+CDQISD++LD  L+ DP ++VACET   T +V+V GEITT   VD  K VR+T + IG+     G DA+ C VL +I++QS DIA GV   L  R         E IGAGDQG MFGYA +ET E MPL   LA KL  RL+EVRK     +LRPDGKTQVTVEY  +N    PVR+  ++ISTQH   +T ++I  +LKEHVI PV+PE+ +DE+T + +NP+GRFVIGGP GDAGLTGR
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKNDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRETIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGTMSDAEIEAIGAGDQGLMFGYACNETKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENN---KPVRIDAIVISTQHHPEITLEQIQRNLKEHVINPVVPEELIDEETKYFINPTGRFVIGGPQGDAGLTGR 259          
BLAST of FC872778 vs. ExPASy Swiss-Prot
Match: METK_BACSU (S-adenosylmethionine synthetase OS=Bacillus subtilis GN=metK PE=3 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 3.375e-74
Identity = 144/256 (56.25%), Postives = 178/256 (69.53%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR 858
            LFTSESV EGHPDK+CDQISD++LD  L++DP ++VACET   T +V+V GEITT   VD  K VR T + IG+     G DA+ C VL +I++QS DIA GV   L  R         E IGAGDQG MFGYA +ET E MPL   LA KL  RL+EVRK     +LRPDGKTQVTVEY  +N    PVR+  ++ISTQH   +T ++I  ++KEHVI PV+PE+ +DE+T + +NP+GRFVIGGP GDAGLTGR
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRQTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGTMSDEEIEAIGAGDQGLMFGYACNETKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENN---KPVRIDAIVISTQHHPEITLEQIQRNIKEHVINPVVPEELIDEETKYFINPTGRFVIGGPQGDAGLTGR 259          
BLAST of FC872778 vs. ExPASy Swiss-Prot
Match: METK_ENTFA (S-adenosylmethionine synthetase OS=Enterococcus faecalis GN=metK PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.407e-74
Identity = 146/255 (57.25%), Postives = 182/255 (71.37%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR----PEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR 858
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LE+DP ++VACET   T +V+VFGEI+T A VD +KIVR T + IG+     G D +   VLV I++QSPDIAQGV   L  R     +DIGAGDQG MFG+A DET E MPL   L+ +L  RL E+RK     +LRPD K+QVTVE Y+D G   P RV T++ISTQHD+  T ++I  D+KE VI  VIP + LD++T + +NP+GRFVIGGP GDAGLTGR
Sbjct:    3 ERHLFTSESVSEGHPDKVADQVSDAILDAILEKDPMARVACETSVTTGLVLVFGEISTTAYVDIQKIVRQTVKDIGYTRAKYGFDGETVAVLVAIDEQSPDIAQGVDAALEVRDQDEKDDIGAGDQGLMFGFAVDETPELMPLPIALSHRLVRRLAELRKEKVLPYLRPDAKSQVTVE-YDDQGQ--PQRVDTIVISTQHDDETTLEQIEKDIKEQVINEVIPHELLDDETKYFINPTGRFVIGGPQGDAGLTGR 254          
BLAST of FC872778 vs. ExPASy Swiss-Prot
Match: METK_PELTS (S-adenosylmethionine synthetase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=metK PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.282e-73
Identity = 147/256 (57.42%), Postives = 174/256 (67.97%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR 858
            LFTSESV EGHPDK+ DQISDAVLDA  E+DP ++VACET   T +V+V GEITT   VD  ++ R+T R IG+     G D D C V+ +I++QS DIAQGV   L  R         E  GAGDQG MFGYAT ET E MPL   LA +L  RL EVRK+    +LRPDGKTQVTVEY N      PVRV T++ISTQH   VT DEI + + EHV+KPV+P ++LD  T F +NP+GRFVIGGP GD GLTGR
Sbjct:    5 LFTSESVTEGHPDKIADQISDAVLDAIFEKDPLARVACETLVTTGLVLVAGEITTDCYVDIPRVARETIREIGYTRAKYGFDCDTCAVITSIDEQSSDIAQGVDRALEVRERYGNEDELEATGAGDQGMMFGYATTETPELMPLPISLAHRLARRLAEVRKSRLLPYLRPDGKTQVTVEYENGR----PVRVDTIVISTQHHPRVTLDEIRSGVLEHVVKPVVPPEFLDGSTRFFVNPTGRFVIGGPQGDTGLTGR 256          
BLAST of FC872778 vs. ExPASy Swiss-Prot
Match: METK_PEDPA (S-adenosylmethionine synthetase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=metK PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.282e-73
Identity = 144/257 (56.03%), Postives = 183/257 (71.21%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR 858
            E  LFTSESV+EGHPDK+ DQISD++LD  L+ DP+++VACET   T +V+V GEI+T A +D +K+VR T + IG+V  + G D ++C V+V I++QSPDIAQGV   L  R         IGAGDQG MFGYAT+ET E MPL  +L+  L  R+ ++RK    S+LRPD K +VTVE Y+DN    PVRV TV++STQHD  VT ++I  D+ E VIK VIP   LDE T F++NP+GRFVIGGP GDAGLTGR
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDSILDELLKNDPDARVACETTVTTGLVVVVGEISTTAYIDIQKVVRKTIKDIGYVGGEYGFDGENCAVIVAIDEQSPDIAQGVDDSLETREGHEDRLNQIGAGDQGLMFGYATNETEELMPLPIMLSHHLMQRIAKLRKEQVISYLRPDAKAEVTVE-YDDNDH--PVRVDTVVLSTQHDPDVTLEQIRQDVIEQVIKAVIPATLLDENTNFYINPTGRFVIGGPQGDAGLTGR 256          
BLAST of FC872778 vs. ExPASy Swiss-Prot
Match: METK_THETN (S-adenosylmethionine synthetase OS=Thermoanaerobacter tengcongensis GN=metK PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.187e-73
Identity = 142/256 (55.47%), Postives = 175/256 (68.36%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR 858
            LFTSESV EGHPDK+CDQISDA+LD  L++DP ++VACET   T +V+V GEITT+  VD  +I RD  R IG+     G DAD C V+ +I++QSPDIA GV+  L  R         E IGAGDQG M G+A DET E MP+  +LA KL  RL EVRKN T S+LRPDGKTQVTVEY  D     PVRV +V++S QH   V +D I  D+ EHV+  +IPE  +D+ T   +NP+GRFV+GGP  D+GLTGR
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTECYVDIPRIARDVIRDIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVNKALEARRGELTDAEIEAIGAGDQGLMIGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEEDR----PVRVDSVVVSAQHAPEVDHDTIEKDIIEHVVNVIIPENMMDKNTKIFVNPTGRFVLGGPQADSGLTGR 255          
BLAST of FC872778 vs. ExPASy Swiss-Prot
Match: METK_LACS1 (S-adenosylmethionine synthetase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=metK PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.187e-73
Identity = 140/257 (54.47%), Postives = 183/257 (71.21%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR 858
            E  LFTSESV+EGHPDK+ DQISD++LDA LEQDPE++VA ET   T +V+V GE++T A +D +K+VR+T + IG+ +   G D D+C V+  I++QSPDIA GV   L  +  D      IGAGDQG MFGYA +ET E MPL   L+  L  ++ EVRKN T ++L PD K QVTVEY ++N    P+R+ TV++STQHDE ++ D+I  D+ + VI  VIP+KYLD  T + +NP+GRFVIGGP GDAGLTGR
Sbjct:    3 EKHLFTSESVSEGHPDKIADQISDSILDAMLEQDPEARVAVETTVTTGLVVVVGEVSTTAHIDIQKVVRETIKEIGYKNGKYGFDGDNCAVITAIDEQSPDIALGVDNSLEVKNGDVDPLDQIGAGDQGMMFGYAINETPELMPLPISLSHHLMKKVAEVRKNGTLAYLGPDAKAQVTVEYDDNN---QPLRIDTVVLSTQHDENISLDQIRKDVMDQVITKVIPDKYLDSNTKYFINPTGRFVIGGPQGDAGLTGR 256          
BLAST of FC872778 vs. ExPASy Swiss-Prot
Match: METK_LACH4 (S-adenosylmethionine synthetase OS=Lactobacillus helveticus (strain DPC 4571) GN=metK PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.187e-73
Identity = 149/260 (57.31%), Postives = 180/260 (69.23%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR 858
            ME  LFTSESV+EGHPDK+ DQISDA+LDA LE+DP S VACET   T MV VFGEI+T A VD + +VR T   IG+   ++G D ++C V+V+I++QSPDIA GV   L  R         + IGAGDQG MFG+A  ET E MPL   LA +L  R+  +RK+ T  WLRPD K QVTVEY  +N    P+RV TV+ISTQ D  V+N EI   + + VIK VIP +YLDEKT F +NPSGRFVIGGP GD+GLTGR
Sbjct:    1 MERRLFTSESVSEGHPDKVADQISDAILDAMLEKDPNSHVACETIVTTGMVFVFGEISTNAYVDIQDVVRKTILRIGYDRPELGFDGNNCAVMVDIDEQSPDIAGGVDHSLETRENESDQDELDQIGAGDQGLMFGFAIKETPELMPLPISLAHRLMRRVASLRKDHTLDWLRPDAKAQVTVEYDENNN---PLRVDTVVISTQTDAEVSNKEIRRAMIDLVIKEVIPARYLDEKTKFLINPSGRFVIGGPKGDSGLTGR 257          
The following BLAST results are available for this feature:
BLAST of FC872778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BRAHW8.880e-7554.65S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_LACF31.515e-7455.64S-adenosylmethionine synthetase OS=Lactobacillus f... [more]
METK_BACA21.515e-7456.64S-adenosylmethionine synthetase OS=Bacillus amylol... [more]
METK_BACSU3.375e-7456.25S-adenosylmethionine synthetase OS=Bacillus subtil... [more]
METK_ENTFA4.407e-7457.25S-adenosylmethionine synthetase OS=Enterococcus fa... [more]
METK_PELTS1.282e-7357.42S-adenosylmethionine synthetase OS=Pelotomaculum t... [more]
METK_PEDPA1.282e-7356.03S-adenosylmethionine synthetase OS=Pediococcus pen... [more]
METK_THETN2.187e-7355.47S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_LACS12.187e-7354.47S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_LACH42.187e-7357.31S-adenosylmethionine synthetase OS=Lactobacillus h... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3CD09ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3CD09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872778 ID=FC872778; Name=FC872778; organism=Citrus clementina; type=EST; length=858bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACCTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCAT
GGTTCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAG
CCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAA
TCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGATGCTGGTCTCA
CTGGACGT
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