FC872785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_RICTY (50S ribosomal protein L3 OS=Rickettsia typhi GN=rplC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 6.775e-37 Identity = 70/163 (42.94%), Postives = 94/163 (57.67%), Query Frame = 1 Query: 220 RTGLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 RTG+IA K G+T+ ++ G RI ++++ VD V KT K G+ +L +G +K +TKP F + K KL+EF ++ED + I + L V HF GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVFKGKK G Sbjct: 2 RTGIIAQKIGMTSVFNDKGERISLTLVKVDGCQVVGHKTLAKHGYNALVIGVKDQKISRVTKPMKQVFANAKISPKTKLKEFRISEDNFIDIASILEVDHFSVGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAG 164 HSP 2 Score: 50.447 bits (119), Expect = 6.775e-37 Identity = 20/52 (38.46%), Postives = 35/52 (67.31%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 845 G+KM G MG Q T++N+ ++ ID R L+ ++G +PG +++ +KDA+ K Sbjct: 159 GKKMAGHMGCNQVTIQNLKIFAIDTNRKLIMIQGSIPGHKNSYLLVKDAIKK 210
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_WIGBR (50S ribosomal protein L3 OS=Wigglesworthia glossinidia brevipalpis GN=rplC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.150e-36 Identity = 69/161 (42.86%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GLI K G+T T++ G+ IPV+V+ + DN + Q+K EK+G+ S+QV G KK K +GHF+ V L R L EF V +++ +G L + FI V+I RW F G ASHG SLSHR+ GS GQ PGKVFKGKK G Sbjct: 3 GLIGRKIGMTRTFNSDGSSIPVTVIKISDNKIVQIKKIEKDGYSSIQVTTGVKKFSRENKSIIGHFKKNKVELGRGLWEFKVDKNSKFYVGQVLSINTFININKVNITGISKGKGFSGTMKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSG 163 HSP 2 Score: 48.521 bits (114), Expect = 1.150e-36 Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G +G + TVKN++V KID L+ ++G VPG+ G+ + IK V Sbjct: 158 GKKMSGHLGYNKNTVKNLFVVKIDLEHELLLIKGSVPGSKGSDLIIKPVV 207
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_ERWT9 (50S ribosomal protein L3 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=rplC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.150e-36 Identity = 67/162 (41.36%), Postives = 88/162 (54.32%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLGE 711 GL+ K G+T + + G IPV+V+ ++ N V+QVK E +G+ ++QV G KK +TKP GHF GV R L EF E A +G S+ V F + VD+ RW F+ A+HG SLSHR GS GQ PGKVFKGKK G+ Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKASRVTKPAAGHFAKAGVEAGRGLWEFRTAEGAEFTVGQSINVDIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQ 164 HSP 2 Score: 50.0618 bits (118), Expect = 1.150e-36 Identity = 22/50 (44.00%), Postives = 38/50 (76.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G++G ++ TV+++ V ++D RNL+ V+G VPGA+G+ + +K AV Sbjct: 158 GKKMAGQLGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAV 207
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_VIBCM (50S ribosomal protein L3 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rplC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.499e-36 Identity = 68/161 (42.24%), Postives = 88/161 (54.66%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GLI K G+T + + G IPV+V+ V+ N VSQVKT E +G+ ++QV G KK +TKPE GHF GV R L EF + +G+ L V F + VD+ RW F+ +HG SLSHR+ GS GQ PG+VFKGKK G Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTKPEAGHFAKAGVEAGRGLWEFRLENGEEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAG 163 HSP 2 Score: 51.6026 bits (122), Expect = 1.499e-36 Identity = 22/50 (44.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G MG ++ T +N+ + ++D RNL+ ++G VPGA+G V +K AV Sbjct: 158 GKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGNVIVKPAV 207
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_VIBCH (50S ribosomal protein L3 OS=Vibrio cholerae GN=rplC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.499e-36 Identity = 68/161 (42.24%), Postives = 88/161 (54.66%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GLI K G+T + + G IPV+V+ V+ N VSQVKT E +G+ ++QV G KK +TKPE GHF GV R L EF + +G+ L V F + VD+ RW F+ +HG SLSHR+ GS GQ PG+VFKGKK G Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTKPEAGHFAKAGVEAGRGLWEFRLENGEEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAG 163 HSP 2 Score: 51.6026 bits (122), Expect = 1.499e-36 Identity = 22/50 (44.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G MG ++ T +N+ + ++D RNL+ ++G VPGA+G V +K AV Sbjct: 158 GKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGNVIVKPAV 207
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_VIBC3 (50S ribosomal protein L3 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=rplC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.499e-36 Identity = 68/161 (42.24%), Postives = 88/161 (54.66%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GLI K G+T + + G IPV+V+ V+ N VSQVKT E +G+ ++QV G KK +TKPE GHF GV R L EF + +G+ L V F + VD+ RW F+ +HG SLSHR+ GS GQ PG+VFKGKK G Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTKPEAGHFAKAGVEAGRGLWEFRLENGEEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAG 163 HSP 2 Score: 51.6026 bits (122), Expect = 1.499e-36 Identity = 22/50 (44.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G MG ++ T +N+ + ++D RNL+ ++G VPGA+G V +K AV Sbjct: 158 GKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGNVIVKPAV 207
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_PASMU (50S ribosomal protein L3 OS=Pasteurella multocida GN=rplC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.952e-36 Identity = 68/161 (42.24%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GL+ K G+T +++ G IPV+V+ ++ N V+QVKT E +G+ ++QV G KK +TKPE GHF GV R L EF TE +G + V F + VD+ RW F+ A+HG SLSHR LGS GQ PG+VFKGKK G Sbjct: 3 GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRVTKPEAGHFVKAGVEAGRGLWEFRTTEGEEFTLGQEINVDIFADVKKVDVTGTSKGKGFAGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAG 163 HSP 2 Score: 46.2098 bits (108), Expect = 1.952e-36 Identity = 21/50 (42.00%), Postives = 34/50 (68.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G +G ++ TV+++ V ++D R L+ V+G VPGA+ V +K AV Sbjct: 158 GKKMAGHLGNERVTVQSLEVVRVDAERKLLLVKGAVPGATNGDVIVKPAV 207
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_VIBFM (50S ribosomal protein L3 OS=Vibrio fischeri (strain MJ11) GN=rplC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.543e-36 Identity = 67/161 (41.61%), Postives = 88/161 (54.66%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GL+ K G+T + + G IPV+V+ V+ N VSQVKT E +G+ ++QV CG KK ++KPE GHF GV R L EF + +G L V F + VD+ RW F+ +HG SLSHR+ GS GQ PG+VFKGKK G Sbjct: 3 GLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVSQVKTVETDGYNAIQVTCGSKKANRVSKPEAGHFAKAGVEAGRGLWEFRLENGEEFAVGAELTVEVFNEIKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAG 163 HSP 2 Score: 50.447 bits (119), Expect = 2.543e-36 Identity = 21/50 (42.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G MG ++ T +N+ + ++D RNL+ ++G VPG++G V +K AV Sbjct: 158 GKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGSTGGNVIVKPAV 207
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_SODGM (50S ribosomal protein L3 OS=Sodalis glossinidius (strain morsitans) GN=rplC PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.315e-36 Identity = 67/162 (41.36%), Postives = 89/162 (54.94%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLGE 711 GLI K G+T + + G IPV+V+ ++ N V+QVK E +G+ ++QV G KK + KPE GHF GV R L EF V + + +G S+ V F + VD+ RW F+ A+HG SLSHR GS GQ PGKVFKGKK G+ Sbjct: 3 GLIGRKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLENDGYRAIQVTAGTKKANRVIKPEAGHFAKAGVEAGRGLWEFRVEDGEEVTVGQSITVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQ 164 HSP 2 Score: 49.2914 bits (116), Expect = 4.315e-36 Identity = 22/50 (44.00%), Postives = 37/50 (74.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G++G ++ TV+++ V ++D RNL+ V+G VPGA+G + +K AV Sbjct: 158 GKKMAGQLGNERVTVQSLDVVRVDVERNLLLVKGAVPGATGGDLIVKPAV 207
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_ENTS8 (50S ribosomal protein L3 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=rplC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.315e-36 Identity = 66/162 (40.74%), Postives = 88/162 (54.32%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLGE 711 GL+ K G+T + + G IPV+V+ V+ N V+QVK +G+ ++QV G KK +TKPE GHF GV R L EF + + +G S+ V F + VD+ RW F+ A+HG SLSHR GS GQ PGKVFKGKK G+ Sbjct: 3 GLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLADGEEYTVGQSISVELFAEVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQ 164 HSP 2 Score: 50.0618 bits (118), Expect = 4.315e-36 Identity = 22/50 (44.00%), Postives = 38/50 (76.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G++G ++ TV+++ V ++D RNL+ V+G VPGA+G+ + +K AV Sbjct: 158 GKKMAGQLGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAV 207 The following BLAST results are available for this feature:
BLAST of FC872785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872785 ID=FC872785; Name=FC872785; organism=Citrus clementina; type=EST; length=887bpback to top |