FC872785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_VIBVU (50S ribosomal protein L3 OS=Vibrio vulnificus GN=rplC PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 7.906e-35 Identity = 65/161 (40.37%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GLI K G+T + + G IPV+V+ V+ N V+QVKT E +G+ ++QV G KK + K E GHF GV R L EF + +G+ L V F + VD+ RW F+ +HG SLSHR+ GS GQ PG+VFKGKK G Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVAQVKTLETDGYAAIQVTAGTKKANRVNKAEAGHFAKAGVEAGRGLWEFRLENGEEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGTVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAG 163 HSP 2 Score: 51.6026 bits (122), Expect = 7.906e-35 Identity = 22/50 (44.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G MG ++ T +N+ + ++D RNL+ ++G VPGA+G V +K AV Sbjct: 158 GKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGNVIVKPAV 207
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_HAEIN (50S ribosomal protein L3 OS=Haemophilus influenzae GN=rplC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.908e-35 Identity = 67/161 (41.61%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GL+ K G+T +++ G +PV+V+ ++ N V+QVKT E +G+ ++QV G KK +TKPE GHF GV R L EF TE +G + V F + VD+ RW F+ A+HG SLSHR LGS GQ PG+VFKGKK G Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVTKPEAGHFVKAGVEAGRGLWEFR-TEGEEFTLGQEINVDIFADVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAG 162 HSP 2 Score: 45.4394 bits (106), Expect = 7.908e-35 Identity = 21/50 (42.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G +G ++ TV+++ V ++D R L+ V+G VPGA V +K AV Sbjct: 157 GKKMAGHLGAERVTVQSLEVVRVDAERKLLLVKGSVPGAINGDVIVKPAV 206
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_HAEIG (50S ribosomal protein L3 OS=Haemophilus influenzae (strain PittGG) GN=rplC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.908e-35 Identity = 67/161 (41.61%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GL+ K G+T +++ G +PV+V+ ++ N V+QVKT E +G+ ++QV G KK +TKPE GHF GV R L EF TE +G + V F + VD+ RW F+ A+HG SLSHR LGS GQ PG+VFKGKK G Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVTKPEAGHFVKAGVEAGRGLWEFR-TEGEEFTLGQEINVDIFADVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAG 162 HSP 2 Score: 45.4394 bits (106), Expect = 7.908e-35 Identity = 21/50 (42.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G +G ++ TV+++ V ++D R L+ V+G VPGA V +K AV Sbjct: 157 GKKMAGHLGAERVTVQSLEVVRVDAERKLLLVKGSVPGAINGNVIVKPAV 206
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_HAEI8 (50S ribosomal protein L3 OS=Haemophilus influenzae (strain 86-028NP) GN=rplC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.908e-35 Identity = 67/161 (41.61%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GL+ K G+T +++ G +PV+V+ ++ N V+QVKT E +G+ ++QV G KK +TKPE GHF GV R L EF TE +G + V F + VD+ RW F+ A+HG SLSHR LGS GQ PG+VFKGKK G Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVTKPEAGHFVKAGVEAGRGLWEFR-TEGEEFTLGQEINVDIFADVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAG 162 HSP 2 Score: 45.4394 bits (106), Expect = 7.908e-35 Identity = 21/50 (42.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G +G ++ TV+++ V ++D R L+ V+G VPGA V +K AV Sbjct: 157 GKKMAGHLGAERVTVQSLEVVRVDAERKLLLVKGSVPGAINGDVIVKPAV 206
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_HAES2 (50S ribosomal protein L3 OS=Haemophilus somnus (strain 2336) GN=rplC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.908e-35 Identity = 68/161 (42.24%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GL+ K G+T +++ G IPV+V+ ++ N V+QVKT E +G+ ++QV G KK +TKPE GHF GV R L EF TE +G + V F + VD+ RW F+ A+HG SLSHR LGS GQ PG+VFKGKK G Sbjct: 3 GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGFKKASRVTKPEAGHFVKAGVEAGRGLWEFR-TEGEEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAG 162 HSP 2 Score: 46.2098 bits (108), Expect = 7.908e-35 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G +G ++ TV+++ + ++D R L+ V+G VPGA+ + V +K AV Sbjct: 157 GKKMAGHLGAERVTVQSLEIVRVDVERKLLLVKGSVPGATNSDVIVKPAV 206
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_HAES1 (50S ribosomal protein L3 OS=Haemophilus somnus (strain 129Pt) GN=rplC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.908e-35 Identity = 68/161 (42.24%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GL+ K G+T +++ G IPV+V+ ++ N V+QVKT E +G+ ++QV G KK +TKPE GHF GV R L EF TE +G + V F + VD+ RW F+ A+HG SLSHR LGS GQ PG+VFKGKK G Sbjct: 3 GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGFKKASRVTKPEAGHFVKAGVEAGRGLWEFR-TEGEEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAG 162 HSP 2 Score: 46.2098 bits (108), Expect = 7.908e-35 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G +G ++ TV+++ + ++D R L+ V+G VPGA+ + V +K AV Sbjct: 157 GKKMAGHLGAERVTVQSLEIVRVDVERKLLLVKGSVPGATNSDVIVKPAV 206
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_SHEAM (50S ribosomal protein L3 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rplC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.030e-34 Identity = 69/163 (42.33%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPV--TEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GLI K G+T + + G IPV+V+ V+ N V+QVKT E +G+ +LQV G KK +TKPE GHF GV R L E + E + +G L V F Q VD+ RW F+ +HG SLSHR+ GS GQ PG+VFKGKK G Sbjct: 4 GLIGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYRALQVTTGAKKAHRVTKPEAGHFAKAGVEAGRGLWEMRLGEGEGEGIEVGAELNVEIFADVQKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLSHRANGSIGQNQTPGRVFKGKKMSG 166 HSP 2 Score: 48.521 bits (114), Expect = 1.030e-34 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G MG ++ T +N+ V ++D RNL+ V+G VPGA+ + IK AV Sbjct: 161 GKKMSGHMGAERVTTQNLDVVRVDVERNLLLVKGAVPGATNGDLIIKPAV 210
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_VIBVY (50S ribosomal protein L3 OS=Vibrio vulnificus (strain YJ016) GN=rplC PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.030e-34 Identity = 64/161 (39.75%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GLI K G+T + + G IPV+V+ V+ N ++QVKT E +G+ ++QV G KK + K E GHF GV R L EF + +G+ L V F + VD+ RW F+ +HG SLSHR+ GS GQ PG+VFKGKK G Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRIAQVKTLETDGYAAIQVTAGTKKANRVNKAEAGHFAKAGVEAGRGLWEFRLENGEEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGTVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAG 163 HSP 2 Score: 51.6026 bits (122), Expect = 1.030e-34 Identity = 22/50 (44.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G MG ++ T +N+ + ++D RNL+ ++G VPGA+G V +K AV Sbjct: 158 GKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGNVIVKPAV 207
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_SHEB9 (50S ribosomal protein L3 OS=Shewanella baltica (strain OS195) GN=rplC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.341e-34 Identity = 69/163 (42.33%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVT--EDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GLI K G+T + + G IPV+V+ V N V+QVKT E +G+ +LQV G KK +TKPE GHF GV R L E + E + +G L V F VD+ RW F+ +HG SLSHRS GS GQ PG+VFKGKK G Sbjct: 4 GLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANRITKPEAGHFAKSGVEAGRGLWEMRLVDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSG 166 HSP 2 Score: 50.0618 bits (118), Expect = 1.341e-34 Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G MG ++ T +N+ V ++D RNL+ VRG VPGA+ + IK AV Sbjct: 161 GKKMSGHMGAERVTTQNLVVVRVDVERNLLLVRGAVPGATNGDLIIKPAV 210
BLAST of FC872785 vs. ExPASy Swiss-Prot
Match: RL3_SHEB8 (50S ribosomal protein L3 OS=Shewanella baltica (strain OS185) GN=rplC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.341e-34 Identity = 69/163 (42.33%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVT--EDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 GLI K G+T + + G IPV+V+ V N V+QVKT E +G+ +LQV G KK +TKPE GHF GV R L E + E + +G L V F VD+ RW F+ +HG SLSHRS GS GQ PG+VFKGKK G Sbjct: 4 GLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANRITKPEAGHFAKSGVEAGRGLWEMRLVDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSG 166 HSP 2 Score: 50.0618 bits (118), Expect = 1.341e-34 Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+KM G MG ++ T +N+ V ++D RNL+ VRG VPGA+ + IK AV Sbjct: 161 GKKMSGHMGAERVTTQNLVVVRVDVERNLLLVRGAVPGATNGDLIIKPAV 210 The following BLAST results are available for this feature:
BLAST of FC872785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872785 ID=FC872785; Name=FC872785; organism=Citrus clementina; type=EST; length=887bpback to top |