FC872790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872790 vs. ExPASy Swiss-Prot
Match: STSY_RAUMA (Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11 Identity = 48/161 (29.81%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 64 MIVADAYKGLLKIS---GNSTVLLTDEAEGQKFKLTDGVDVAD-DGMIYFTDASNKYYLR--EYILDIFEGKPNGRLLSFDPVTKETKVLVSDLYFANGVVLSPDQTHLVYCETSMRRCRKFYIKGKNAGRVEKFIETLPGLPDNIRYDGEGHYLIALATE 528 + + D Y L + G++T L T +G FK V V G++YFTD S Y R + I+D + GRL+ +DP TKET +L+ +L+ G +S D + ++ E + K++++G G E ++ +P P NI+ + +GH+ ++ + E Sbjct: 114 LYIVDCYYHLSVVGSEGGHATQLATS-VDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSD--KTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEE 269
BLAST of FC872790 vs. ExPASy Swiss-Prot
Match: STSY_CATRO (Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11 Identity = 48/160 (30.00%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 64 MIVADAYKGLLKIS--GNSTVLLTDEAEGQKFKLTDGVDVAD-DGMIYFTDASNKYY-LREYILDIFEGKPN-GRLLSFDPVTKETKVLVSDLYFANGVVLSPDQTHLVYCETSMRRCRKFYIKGKNAGRVEKFIETLPGLPDNIRYDGEGHYLIALATE 528 M + D + L + G L +G FK V V G++YFTD S+ + E + +I GRL+ +DP TKET +L+ +L+ G +S D + +V E R K++++G G E F+ T+P P NI+ + +GH+ ++ + E Sbjct: 120 MYIVDGHYHLCVVGKEGGYATQLATSVQGVPFKWLYAVTVDQRTGIVYFTDVSSIHDDSPEGVEEIMNTSDRTGRLMKYDPSTKETTLLLKELHVPGGAEISADGSFVVVAEFLSNRIVKYWLEGPKKGSAE-FLVTIPN-PGNIKRNSDGHFWVSSSEE 277 The following BLAST results are available for this feature:
BLAST of FC872790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872790 ID=FC872790; Name=FC872790; organism=Citrus clementina; type=EST; length=886bpback to top |