FC872797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872797 vs. ExPASy Swiss-Prot
Match: NACA_PONAB (Nascent polypeptide-associated complex subunit alpha OS=Pongo abelii GN=NACA PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.375e-25 Identity = 64/138 (46.38%), Postives = 87/138 (63.04%), Query Frame = 2 Query: 236 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 649 AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED F++ G ++ +DI+LVM+QA VSR+KAV+ALK ++ DIV+AIMELT Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKV--QGEAVSNIQENTQTPTVQEESEEEEVDETDVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214
BLAST of FC872797 vs. ExPASy Swiss-Prot
Match: NACA_MOUSE (Nascent polypeptide-associated complex subunit alpha OS=Mus musculus GN=Naca PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.375e-25 Identity = 64/138 (46.38%), Postives = 87/138 (63.04%), Query Frame = 2 Query: 236 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 649 AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED F++ G ++ +DI+LVM+QA VSR+KAV+ALK ++ DIV+AIMELT Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKV--QGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214
BLAST of FC872797 vs. ExPASy Swiss-Prot
Match: NACA_HUMAN (Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.375e-25 Identity = 64/138 (46.38%), Postives = 87/138 (63.04%), Query Frame = 2 Query: 236 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 649 AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED F++ G ++ +DI+LVM+QA VSR+KAV+ALK ++ DIV+AIMELT Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKV--QGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214
BLAST of FC872797 vs. ExPASy Swiss-Prot
Match: NACA_DANRE (Nascent polypeptide-associated complex subunit alpha OS=Danio rerio GN=naca PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.375e-25 Identity = 64/138 (46.38%), Postives = 86/138 (62.32%), Query Frame = 2 Query: 236 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 649 AM KLG++ V GV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED F++ G ++ +DI+LVM+QA VSR+KAV+ALK +N DIV+AIMELT Sbjct: 79 AMSKLGLRQVAGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKV--QGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNNNDIVNAIMELT 214
BLAST of FC872797 vs. ExPASy Swiss-Prot
Match: NACA_BOVIN (Nascent polypeptide-associated complex subunit alpha OS=Bos taurus GN=NACA PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.375e-25 Identity = 64/138 (46.38%), Postives = 87/138 (63.04%), Query Frame = 2 Query: 236 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 649 AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED F++ G ++ +DI+LVM+QA VSR+KAV+ALK ++ DIV+AIMELT Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKV--QGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214
BLAST of FC872797 vs. ExPASy Swiss-Prot
Match: NACAM_MOUSE (Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus GN=Naca PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.375e-25 Identity = 64/138 (46.38%), Postives = 87/138 (63.04%), Query Frame = 2 Query: 236 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 649 AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED F++ G ++ +DI+LVM+QA VSR+KAV+ALK ++ DIV+AIMELT Sbjct: 2051 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKV--QGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186
BLAST of FC872797 vs. ExPASy Swiss-Prot
Match: NACA_DROME (Nascent polypeptide-associated complex subunit alpha OS=Drosophila melanogaster GN=Nacalpha PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.282e-24 Identity = 61/137 (44.53%), Postives = 84/137 (61.31%), Query Frame = 2 Query: 239 MLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 649 MLKLG+K + GV+RVTI+++KNILF I+ PDV+K+P+S+TY++FGEAKIED F+ P+ A +DI+LV+TQA +R+KA+KALK +N DIV+AIMELT Sbjct: 80 MLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEAAGA-ADSVGATTSVAPIAEEDEEDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELT 215
BLAST of FC872797 vs. ExPASy Swiss-Prot
Match: NACAD_HUMAN (NAC-alpha domain-containing protein 1 OS=Homo sapiens GN=NACAD PE=2 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.675e-24 Identity = 65/142 (45.77%), Postives = 86/142 (60.56%), Query Frame = 2 Query: 236 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVM----AKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 649 AM KLG++ + GV+R+TI+++KNILF I+KPDVFKSP S+TYV+FGEAKIED F++P S + A RDI+LVM QA VSR+KAV+AL+ ++ DIV+AIMELT Sbjct: 1420 AMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGLELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELT 1561
BLAST of FC872797 vs. ExPASy Swiss-Prot
Match: NACA_CHILA (Nascent polypeptide-associated complex subunit alpha OS=Chinchilla lanigera PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.364e-24 Identity = 62/138 (44.93%), Postives = 86/138 (62.32%), Query Frame = 2 Query: 236 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 649 AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED F++ G ++ +DI+ VM+QA VSR+KAV+ALK ++ +IV+AIMELT Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKV--QGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIEWVMSQANVSRAKAVRALKNNSNNIVNAIMELT 214
BLAST of FC872797 vs. ExPASy Swiss-Prot
Match: NACA2_HUMAN (Nascent polypeptide-associated complex subunit alpha-2 OS=Homo sapiens GN=NACA2 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.780e-22 Identity = 61/138 (44.20%), Postives = 81/138 (58.70%), Query Frame = 2 Query: 236 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 649 AM KLG+ VTGV+RVTI ++KNILF I+K DV+KSP S+ Y++FGEAKI+D FR+ G + +D+ LVM+QA VSR+KAV+ALK ++ DIV+AIMELT Sbjct: 79 AMSKLGLLQVTGVTRVTIWKSKNILFVITKLDVYKSPASDAYIVFGEAKIQDLSQQAQLAAAEKFRV--QGEAVGNIQENTQTPTVQEESEEEEVDETGVEVKDVKLVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214 The following BLAST results are available for this feature:
BLAST of FC872797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872797 ID=FC872797; Name=FC872797; organism=Citrus clementina; type=EST; length=801bpback to top |