FC872815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872815 vs. ExPASy Swiss-Prot
Match: RL35_PIG (60S ribosomal protein L35 OS=Sus scrofa GN=RPL35 PE=2 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 9.037e-31 Identity = 68/122 (55.74%), Postives = 90/122 (73.77%), Query Frame = 3 Query: 66 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 431 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKFAVK 122
BLAST of FC872815 vs. ExPASy Swiss-Prot
Match: RL35_OPHHA (60S ribosomal protein L35 OS=Ophiophagus hannah GN=RPL35 PE=2 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.180e-30 Identity = 69/122 (56.56%), Postives = 88/122 (72.13%), Query Frame = 3 Query: 66 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 431 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ LKT++++++E +P RKYA+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEEGLKTKKQQRKERLYPPRKYAVK 122
BLAST of FC872815 vs. ExPASy Swiss-Prot
Match: RL35_HIPCM (60S ribosomal protein L35 OS=Hippocampus comes GN=rpl35 PE=2 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 7.650e-30 Identity = 66/122 (54.10%), Postives = 90/122 (73.77%), Query Frame = 3 Query: 66 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 431 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ SL+T++++++++ + +RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKNELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVITQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHEESLRTKKQQRKDLLYSIRKFAVK 122
BLAST of FC872815 vs. ExPASy Swiss-Prot
Match: RL35_XENTR (60S ribosomal protein L35 OS=Xenopus tropicalis GN=rpl35 PE=2 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29 Identity = 66/122 (54.10%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 66 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 431 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ L+T+++++++ F RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHEEGLRTKKQQRKDRLFSARKFAVK 122
BLAST of FC872815 vs. ExPASy Swiss-Prot
Match: RL35_ICTPU (60S ribosomal protein L35 OS=Ictalurus punctatus GN=rpl35 PE=2 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 8.458e-29 Identity = 67/122 (54.92%), Postives = 86/122 (70.49%), Query Frame = 3 Query: 66 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 431 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRP+KTRAIRR+LTKH+ L T++ ++R + MRK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKHVDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPRKTRAIRRQLTKHEQGLMTKKMQRRSRLYSMRKFAVK 122
BLAST of FC872815 vs. ExPASy Swiss-Prot
Match: RL35_PLAFE (60S ribosomal protein L35 OS=Platichthys flesus GN=rpl35 PE=2 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.443e-28 Identity = 64/122 (52.46%), Postives = 89/122 (72.95%), Query Frame = 3 Query: 66 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 431 MA+IK +LR K K + RVAKVTGGA +KL+KI VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRP+KTRA+RRRL KH+ SL+T++++++++ + +RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKNEPSQLRVAKVTGGAASKLTKICVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPRKTRALRRRLNKHEESLRTKKQQRKDLLYSIRKFAVK 122
BLAST of FC872815 vs. ExPASy Swiss-Prot
Match: RL35_DANRE (60S ribosomal protein L35 OS=Danio rerio GN=rpl35 PE=2 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.884e-28 Identity = 66/122 (54.10%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 66 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 431 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRAIRR+LTKH+ +L T++ +++ + +RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHEENLMTKKMQRKSRLYSIRKFAVK 122
BLAST of FC872815 vs. ExPASy Swiss-Prot
Match: RL35_SCHPO (60S ribosomal protein L35 OS=Schizosaccharomyces pombe GN=rpl35 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.008e-26 Identity = 60/119 (50.42%), Postives = 82/119 (68.91%), Query Frame = 3 Query: 75 IKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 431 +K ELR++S+ + RV K+ GG+ +KLSKIK R IA++LTVI++ + A REAYKNKK++PLDLR KKTRAIRR LT ++ S KT ++ K+E YFP+RKYA+K Sbjct: 3 LKTFELRKQSQENLAEQLQELRQELASLRVQKIAGGSGSKLSKIKTTRKDIARILTVINESNRLAAREAYKNKKYIPLDLRQKKTRAIRRALTPYEQSRKTLKQIKKERYFPLRKYALK 121
BLAST of FC872815 vs. ExPASy Swiss-Prot
Match: RL35_YEAST (60S ribosomal protein L35 OS=Saccharomyces cerevisiae GN=RPL35A PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.495e-22 Identity = 59/122 (48.36%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 66 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 431 MA +K +ELR KSK +V K++ + L KIK VR SIA VLTVI+++Q+ A+R+ YK KK+ P DLR KKTRA+RR LTK +AS TE+++K+++ FP RKYAIK Sbjct: 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPS---LPKIKTVRKSIACVLTVINEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYAIK 119
BLAST of FC872815 vs. ExPASy Swiss-Prot
Match: RL35_CAEEL (60S ribosomal protein L35 OS=Caenorhabditis elegans GN=rpl-35 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21 Identity = 56/122 (45.90%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 66 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 431 M ++K LR + K RV+KVTGGA +KLSKI+VVR +IA++LTVI+Q QK LR+ Y + K+ P+DLR KKTRAIRRRLT H+ SL++ +++ + +RK+A+K Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTVINQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFAVK 122 The following BLAST results are available for this feature:
BLAST of FC872815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872815 ID=FC872815; Name=FC872815; organism=Citrus clementina; type=EST; length=681bpback to top |