FC872829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15 Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 329 KEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVE 520 +++ YRGVR RPWGKFAAEIRD TR G RVWLGTF++ F +RGS AILNFP+E Sbjct: 133 EKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLE 196
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.892e-15 Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 2 Query: 302 SSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVE 520 SS + K+ +RGVRRRPWGKFAAEIRD +R+G R+WLGTF++ F++RG AILNFP E Sbjct: 7 SSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPNE 79
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 251 ATSEALVSSKRIKEEEVSSTTEENPTKE---KSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVE 520 ++S L SS E + S E +E + YRGVRRRPWGKFAAEIRD + G R+WLGTF+S F +RG A+LNFP++ Sbjct: 77 SSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLD 169
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: ERF91_ARATH (Ethylene-responsive transcription factor ERF091 OS=Arabidopsis thaliana GN=ERF091 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.861e-13 Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 2 Query: 329 KEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGS-SAILNFPVERVQESLKDMKCN 556 K + YRGVR+RPWGKFAAEIRDSTR+G+RVWLGTF + +RG+ A NF +E V +++ +M CN Sbjct: 106 KTRKYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNFQLETVIKAM-EMDCN 181
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 233 AKATPEATSEALVSSKRIKEEEVSSTTEENPTKEKS--YRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVERVQE 532 +K+ E + VSS++ K + VS + E + +E+ YRG+R+RPWGK+AAEIRD ++ G+RVWLGTF + +RG A LNFP +V+E Sbjct: 13 SKSESEPSQLGSVSSRK-KRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSK-GVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEE 112
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.131e-12 Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 2 Query: 191 NENDSKEMLLYGLIAKA-----TPEATSEALVSSKRIKEEEVSSTTEENP-TKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFP 514 N + KE+ ++++ E T + + SS I ++ S T +E +++++YRGVR+RPWGK+AAEIRD + RVWLGTFD+ F RG A LNFP Sbjct: 16 NREEKKELCCCSTLSESDVSDFVSELTGQPIPSS--IDDQSSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNK-AARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.046e-12 Identity = 40/110 (36.36%), Postives = 62/110 (56.36%), Query Frame = 2 Query: 230 IAKATPEATSEALVSSK-----RIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVERVQESLKD 544 + K E +++VS K + +++ V + T + +RGVR+RPWGK+AAEIRD +R +RVWLGTFD+ +RG +A LNFP V E++++ Sbjct: 45 VKKYVKEVVLDSVVSDKEKPMKKKRKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRR-VRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPPPVTENVEE 153
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = 2 Query: 236 KATPEATSEALVSSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVERVQESLKDMKCNTEE 565 K A +E V K++ + + N ++ YRG+R+RPWGK+AAEIRD R G R+WLGTF + +RGS A +NFP E +MK N+++ Sbjct: 90 KPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRD-PREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEE-------NMKANSQK 191
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 272 SSKRIKEEEVSSTTEENP-TKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVERVQE 532 S+K I + + S + ++ T+ K +RGVR+RPWG++AAEIRD TR G RVWLGT+D+ ++G A+ NFPV E Sbjct: 74 STKSIGDRKRRSVSPDSDVTRRKKFRGVRQRPWGRWAAEIRDPTR-GKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAE 160
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 40/97 (41.24%), Postives = 52/97 (53.61%), Query Frame = 2 Query: 224 GLIAKATPEATSEALVSSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFP 514 G+ + P + + S I+E + EE K++ YRGVR+RPWGK+AAEIRD R RVWLGTFD+ RG+ A LNFP Sbjct: 38 GIDSAPIPSSFARVDSSHNPIEESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHR-AARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133 The following BLAST results are available for this feature:
BLAST of FC872829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872829 ID=FC872829; Name=FC872829; organism=Citrus clementina; type=EST; length=928bpback to top |