FC872829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.570e-11 Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 2 Query: 221 YGLIAKATPEATSEALVSSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFP 514 +G + + T++ V + +K+E+ + + K YRG+R+RPWGK+AAEIRD R G+RVWLGTF++ +RG A LNFP Sbjct: 40 WGFYSTSKLHPTNQVNVKEEAVKKEQATEPGKRRKRKNV-YRGIRKRPWGKWAAEIRD-PRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFP 135
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11 Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 2 Query: 269 VSSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVERVQESLKDMKCNTEEGCSPVVALKRKHSMRRKMVT 625 V S+ VS+TT T EK +RGVR+RPWGK+AAEIRD + +R+WLGT+++ +RG A+ NF V + K SPV K+K++ +K VT Sbjct: 100 VKSESTVSPVVSATT--TTTGEKKFRGVRQRPWGKWAAEIRDPLKR-VRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEK-----KAPPPSPVKKKKKKNNKSKKSVT 210
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 260 EALVSSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFP 514 + L++ + +E SS + E P K YRGVR+RPWGK+AAEIRD + RVWLGTF++ RGS A LNFP Sbjct: 37 QPLITGSAVTKECESSMSLERP---KKYRGVRQRPWGKWAAEIRDPHK-ATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117
BLAST of FC872829 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 37/81 (45.68%), Postives = 43/81 (53.09%), Query Frame = 2 Query: 272 SSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFP 514 SS K+ E + K+ YRGVR+RPWGKFAAEIRD R RVWLGTF++ RG A LNFP Sbjct: 113 SSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKR-ATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFP 192 The following BLAST results are available for this feature:
BLAST of FC872829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872829 ID=FC872829; Name=FC872829; organism=Citrus clementina; type=EST; length=928bpback to top |