FC872832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.696e-19 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAE 583 KKR+LT EQ LLE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E + LK + H+ ++ + RL S+V +L EKL E Sbjct: 77 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKE 177
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.696e-19 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAE 583 KKR+LT EQ LLE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E + LK + H+ ++ + RL S+V +L EKL E Sbjct: 79 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKE 179
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18 Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKL 571 G GG KKR+L+ EQ LE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E YA L+ + H+ + +K L +E+ LK KL Sbjct: 35 GRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKL 139
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18 Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKL 571 G GG KKR+L+ EQ LE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E YA L+ + H+ + +K L +E+ LK KL Sbjct: 35 GRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKL 139
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18 Identity = 58/132 (43.94%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 176 SQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKL 571 + + P D T TG V E K R N N +KK++LT+ Q LE F E KL+SDRK KL+ ELGL PRQ+AVWFQNRRAR K K++E+ Y +L+ ++ V EK L EV L+ L Sbjct: 42 NSYTPGD--TQTGPVISVPESEKIMNAYRFPNNNNE----MIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALL 167
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.403e-17 Identity = 56/129 (43.41%), Postives = 76/129 (58.91%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVV-------EKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSA 643 G GG KKR+L+ EQ LE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E YA L+ +++++ + +K L +E+ LK KL E S E + + P A Sbjct: 46 GGGGE---KKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVKEEPAASDGPPA 171
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.403e-17 Identity = 56/129 (43.41%), Postives = 76/129 (58.91%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVV-------EKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSA 643 G GG KKR+L+ EQ LE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E YA L+ +++++ + +K L +E+ LK KL E S E + + P A Sbjct: 46 GGGGE---KKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVKEEPAASDGPPA 171
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSJ (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. japonica GN=HOX8 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.832e-17 Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVE-------KTRLESEVATLKEKL 571 G GG KKR+L AEQ LE F ++KL+ +RK ++A +L L PRQVAVWFQNRRAR KTK+IE +A L++ H+ + +E K L +E+A L++++ Sbjct: 57 GGGGGLGEKKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRV 161
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSI (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica GN=HOX8 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.832e-17 Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVE-------KTRLESEVATLKEKL 571 G GG KKR+L AEQ LE F ++KL+ +RK ++A +L L PRQVAVWFQNRRAR KTK+IE +A L++ H+ + +E K L +E+A L++++ Sbjct: 33 GGGGGLGEKKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRV 137
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.832e-17 Identity = 60/155 (38.71%), Postives = 81/155 (52.26%), Query Frame = 2 Query: 296 ALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLE-------SEVATLKEKLSV------AEKEIKKMSELIEGISLNN-----------PSATIPTDMDTVDSPFTL 688 A KKR+L EQ + LE +F ++KLE +RK KLA ELGL PRQVA+WFQNRRAR KTK++E Y LK+ + + + L+ ++ LK KL+V E K E + + NN P IPTD T + F + Sbjct: 70 AEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENGALKAVEANQSVMANNEVLELSHRSPSPPPHIPTDAPTSELAFEM 224 The following BLAST results are available for this feature:
BLAST of FC872832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872832 ID=FC872832; Name=FC872832; organism=Citrus clementina; type=EST; length=898bpback to top |