FC872832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATB23_ARATH (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana GN=ATHB-23 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.832e-17 Identity = 53/110 (48.18%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLN 631 KKR+L EQ + LE F +KLESDRK +LA LGL PRQ+A+WFQNRRAR KTK++E+ Y LK E++ R E+EV + + A+ K E IE I+LN Sbjct: 71 KKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESL-----RDENEVLQTQNQKLQAQVMALKSREPIESINLN 175
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.393e-17 Identity = 56/136 (41.18%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAH-------ENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFTL 688 KKR+L+ Q + LE +F E+KLE +RK KLA ELGL PRQVAVWFQNRRAR KTK++E+ Y LKT + +++ + L E++ LK KL+ E E NN + T +D+ + +L Sbjct: 62 KKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGE--------EEEEENNAAVTTESDISVKEEEVSL 189
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17 Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVV-------EKTRLESEVATLKEKL 571 KKR+L EQ LE F ++KL+ DRK ++A +LGL PRQVAVWFQNRRAR KTK++E +A L+ H+ + +K L +E+ L+EKL Sbjct: 72 KKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDALAAEIRELREKL 168
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSI (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica GN=HOX13 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVV--------VEKTRLESEVATLKEKL 571 KKR+L EQ LE F ++KL+ DRK ++A +LGL PRQVAVWFQNRRAR KTK++E +A L+ H + + +K L +E+ L+EKL Sbjct: 72 KKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRAQHNDALRADCDALRRDKDALAAEIRELREKL 169
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.082e-17 Identity = 51/116 (43.97%), Postives = 69/116 (59.48%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATI 649 KKR+L +Q + LE +F E+KLE +RK KLA ELGL PRQVAVWFQNRRAR KTK++E+ Y LK +++ L +L+ +EI K+ + G NN + I Sbjct: 59 KKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDS-------LRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAI 167
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSJ (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. japonica GN=HOX25 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 9.094e-17 Identity = 45/101 (44.55%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 296 ALKKRKLTAEQAELLEMHFGNE-HKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIK 595 A +KR+LTAEQ LE F E KLE +RK +LA LG+ PRQVAVWFQNRRAR KTK++E + L+ AH+ ++ +T L ++ +L+ ++ + ++++ Sbjct: 80 AARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRTALAADNESLRSQVILLTEKLQ 180
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSI (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. indica GN=HOX25 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.456e-16 Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 296 ALKKRKLTAEQAELLEMHFGNE-HKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVV-------VEKTRLESEVATLKEKLSVAEK 586 A +KR+LTAEQ LE F E KLE +RK +LA LG+ PRQVAVWFQNRRAR KTK++E + L+ AH+ ++ + L S+V L EKL K Sbjct: 20 AARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRAALAADNESLRSQVILLTEKLQANGK 124
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.513e-16 Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVE-------KTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDT 667 KKR+L EQ + LE +F +KLE +RK +LA LGL PRQ+A+WFQNRRAR KTK++E+ Y TLK + + E +L++E+ LK + + K +E +N S + D+ T Sbjct: 85 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESINLNKETEGSCSNRSDNSSDNLRLDIST 213
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.698e-16 Identity = 46/118 (38.98%), Postives = 76/118 (64.41%), Query Frame = 2 Query: 263 KRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIE 616 K G GG A +K++ + EQ + LE F + KLE +K +LA ELGL PRQVA+WFQN+RAR K+K++E Y+ L+ ++ ++ L+ KEKL++ K+++K++E+++ Sbjct: 17 KGGKGGGGGGAADRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLK------KEKLALI-KQLEKLAEMLQ 127
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSI (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 7.698e-16 Identity = 46/118 (38.98%), Postives = 76/118 (64.41%), Query Frame = 2 Query: 263 KRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIE 616 K G GG A +K++ + EQ + LE F + KLE +K +LA ELGL PRQVA+WFQN+RAR K+K++E Y+ L+ ++ ++ L+ KEKL++ K+++K++E+++ Sbjct: 17 KGGKGGGGGGAADRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLK------KEKLALI-KQLEKLAEMLQ 127 The following BLAST results are available for this feature:
BLAST of FC872832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872832 ID=FC872832; Name=FC872832; organism=Citrus clementina; type=EST; length=898bpback to top |