FC872832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.234e-14 Identity = 39/101 (38.61%), Postives = 67/101 (66.34%), Query Frame = 2 Query: 305 KRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSE 607 +++ + EQ + LE+ F +E +LE +K ++A ELGL PRQVA+WFQN+RAR KTK++E+ Y TL+ + N+ + ++ E +L +L +E+++ E Sbjct: 31 QKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKE 131
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSI (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica GN=HOX24 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 7.206e-14 Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHF-GNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAH-------ENVVVEKTRLESEVATLKEKLS 574 G GG +KR+ T EQ LE F KLE K +LA ELGL PRQVA+WFQN+RAR ++K+IE YA L+ + E++ EK L ++V L+ KL+ Sbjct: 57 GGGGGGGERKRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALAAQVDELRGKLN 163
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSJ (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica GN=HOX24 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14 Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHF-GNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAH-------ENVVVEKTRLESEVATLKEKLS 574 G GG +KR+ T EQ LE F KLE K +LA ELGL PRQVA+WFQN+RAR ++K+IE YA L+ + E++ EK L +V L+ KL+ Sbjct: 56 GGGGGGGERKRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALADQVDELRGKLN 162
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSJ (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHFGNEH-KLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAH-------ENVVVEKTRLESEVATLKEKLSVAEK 586 G GG +KR+ T EQ LE F H KLE K +LA ELGL PRQVA+WFQN+RAR ++K++E YA L++ + E++ EK L ++ L+E+L E+ Sbjct: 66 GRGG-AGERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREE 175
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSI (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica GN=HOX22 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHFGNEH-KLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAH-------ENVVVEKTRLESEVATLKEKLSVAEK 586 G GG +KR+ T EQ LE F H KLE K +LA ELGL PRQVA+WFQN+RAR ++K++E YA L++ + E++ EK L ++ L+E+L E+ Sbjct: 66 GRGG-AGERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREE 175
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13 Identity = 50/127 (39.37%), Postives = 60/127 (47.24%), Query Frame = 2 Query: 224 QQGEPSKPKRRQRKR-----------NTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKL 571 + G PS P Q + NGG A KK +L+ EQ+ LE F L +K LA L L PRQV VWFQNRRAR K K+ E LK E + E RL+ EVA L+ L Sbjct: 116 EAGRPSSPSSMQEASTRQQVADQEAADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGTL 242
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13 Identity = 50/127 (39.37%), Postives = 60/127 (47.24%), Query Frame = 2 Query: 224 QQGEPSKPKRRQRKR-----------NTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKL 571 + G PS P Q + NGG A KK +L+ EQ+ LE F L +K LA L L PRQV VWFQNRRAR K K+ E LK E + E RL+ EVA L+ L Sbjct: 116 EAGRPSSPSSMQEASTRQQVADQEAADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGAL 242
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.359e-12 Identity = 42/92 (45.65%), Postives = 52/92 (56.52%), Query Frame = 2 Query: 287 GFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 G A KK +LT +Q+ LLE F + L +K LA +L L PRQV VWFQNRRAR K K+ E LK E + E RL+ E+ LK Sbjct: 108 GISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELK 199
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 239 SKPKRRQRKRNTNGNG---------GFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 S KR +R+ +T+ G G + KK +L+ +Q+ +LE F + L +K LA +LGL RQV VWFQNRRAR K K+ E L+ EN+ E RL+ EV L+ Sbjct: 99 STGKRSEREEDTDPQGSRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELR 215
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.318e-12 Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 G GG KK +L+ EQ+ LLE F H L +K+ LA +L L PRQV VWFQNRRAR K K+ E LK ++ E RL+ EV L+ Sbjct: 70 GVGGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELR 164 The following BLAST results are available for this feature:
BLAST of FC872832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872832 ID=FC872832; Name=FC872832; organism=Citrus clementina; type=EST; length=898bpback to top |