FC872832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.318e-12 Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 278 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 G GG KK +L+ EQ+ LLE F H L +K+ LA +L L PRQV VWFQNRRAR K K+ E LK ++ E RL+ EV L+ Sbjct: 70 GVGGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELR 164
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.027e-12 Identity = 43/96 (44.79%), Postives = 55/96 (57.29%), Query Frame = 2 Query: 275 NGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 +GNG + KK +L+ EQA +LE F L +K LA +L L RQV VWFQNRRAR K K+ E LK EN+ E RL+ EV+ L+ Sbjct: 153 SGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELR 248
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.954e-12 Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 254 RQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 R R ++ + G A KK +L+ EQ+ LE F L +K LA +L L PRQV VWFQNRRAR K K+ E LK E + E RL E+A L+ Sbjct: 158 RSSSRASDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELR 260
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.954e-12 Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 254 RQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 R R ++ + G A KK +L+ EQ+ LE F L +K LA +L L PRQV VWFQNRRAR K K+ E LK E + E RL E+A L+ Sbjct: 158 RSSSRASDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELR 260
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.954e-12 Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2 Query: 272 TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVA 580 + G GG KK +LT EQ+ LLE F + L +K +LA +L L PRQV VWFQNRRAR K K+ E LK E++ E +L+ E+ L+ S A Sbjct: 105 SGGGGGGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRLASPA 207
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 2 Query: 263 KRNTNGNGGFR---ALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLS 574 +R+ +G GG + KK +LT EQA LLE F + L K +LA +LGL RQV VWFQNRRAR K K+ E L+ +++ + RL ++A L+ S Sbjct: 101 RRSPSGGGGDEEGASRKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHLAADNARLRRDLAELRRSSS 207
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 272 TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVA 580 + G GG R KK +LT EQ+ LLE F + L +K +LA +L L PRQV VWFQNRRAR K K+ E LK E++ E +L+ E+ L+ S A Sbjct: 107 SGGGGGTR--KKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRLASAA 207
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 42/92 (45.65%), Postives = 52/92 (56.52%), Query Frame = 2 Query: 287 GFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 G A KK +LT +Q+ LLE +F L +K LA +L L PRQV VWFQNRRAR K K+ E LK E + E RL+ E+ LK Sbjct: 121 GVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLK 212
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12 Identity = 46/112 (41.07%), Postives = 60/112 (53.57%), Query Frame = 2 Query: 251 RRQRKRNTNGNG--------GFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 +R+R+ +G+G G KK +L+ +QA +LE F L +K LA LGL PRQV VWFQNRRAR K K+ E LK E + E RLE E+A L+ Sbjct: 90 KRERELERSGSGVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLR 201
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12 Identity = 46/112 (41.07%), Postives = 60/112 (53.57%), Query Frame = 2 Query: 251 RRQRKRNTNGNG--------GFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 +R+R+ +G+G G KK +L+ +QA +LE F L +K LA LGL PRQV VWFQNRRAR K K+ E LK E + E RLE E+A L+ Sbjct: 90 KRERELERSGSGVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLR 201 The following BLAST results are available for this feature:
BLAST of FC872832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872832 ID=FC872832; Name=FC872832; organism=Citrus clementina; type=EST; length=898bpback to top |