FC872832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12 Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = 2 Query: 254 RQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 R R ++ + G A KK +L+ EQ+ LE F L +K LA +L L PRQV VWFQNRRAR K K+ E LK E + E RL+ E+A L+ Sbjct: 161 RSCSRASDEDDGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELR 263
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12 Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = 2 Query: 254 RQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 R R ++ + G A KK +L+ EQ+ LE F L +K LA +L L PRQV VWFQNRRAR K K+ E LK E + E RL+ E+A L+ Sbjct: 74 RSCSRASDEDDGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELR 176
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-11 Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 203 TPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKE-KLSVA 580 T + + ++G PS + + + G + KK +L+ +QA +LE F + L +K LA +L L PRQV VWFQNRRAR K K+ E LK E + E RL E+ L+ KL+ A Sbjct: 124 TLSSLSGKRGAPSAATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATA 250
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-11 Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 203 TPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKE-KLSVA 580 T + + ++G PS + + + G + KK +L+ +QA +LE F + L +K LA +L L PRQV VWFQNRRAR K K+ E LK E + E RL E+ L+ KL+ A Sbjct: 124 TLSSLSGKRGAPSAATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATA 250
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.962e-11 Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 266 RNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 R+ + +G R KK +LT EQ+ LLE F L +K LA +L L PRQV VWFQNRRAR K K+ E LK E + E RL+ E+ L+ Sbjct: 117 RDDDDDGSTR--KKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELR 213
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.962e-11 Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 266 RNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 R+ + +G R KK +LT EQ+ LLE F L +K LA +L L PRQV VWFQNRRAR K K+ E LK E + E RL+ E+ L+ Sbjct: 117 RDDDDDGSTR--KKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELR 213
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.962e-11 Identity = 43/104 (41.35%), Postives = 56/104 (53.85%), Query Frame = 2 Query: 251 RRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 R + N + NG R KK +L+ +Q+ LE F L +K LA +L L PRQV VWFQNRRAR K K+ E LK E++ E RL+ EV L+ Sbjct: 175 RASNEDNDDENGSTR--KKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELR 276
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.962e-11 Identity = 41/97 (42.27%), Postives = 53/97 (54.64%), Query Frame = 2 Query: 272 TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 ++ +G KK +LT EQ+ LLE F H L +K+ LA L L PRQ+ VWFQNRRAR K K+ E LK ++ E RL EV L+ Sbjct: 129 SHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELR 225
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11 Identity = 41/93 (44.09%), Postives = 52/93 (55.91%), Query Frame = 2 Query: 284 GGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 GG KK +L+ +Q+ +LE F + L +K LA +LGL RQV VWFQNRRAR K K+ E LK E + E RLE E A L+ Sbjct: 129 GGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELR 221
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSJ (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11 Identity = 41/93 (44.09%), Postives = 52/93 (55.91%), Query Frame = 2 Query: 284 GGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 562 GG A KK +L+ +QA +LE F H L +K LA L L PRQV VWFQNRRAR K K+ E LK + + + RL E+A L+ Sbjct: 88 GGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELR 180 The following BLAST results are available for this feature:
BLAST of FC872832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872832 ID=FC872832; Name=FC872832; organism=Citrus clementina; type=EST; length=898bpback to top |